UNITED STATES SECURITIES AND EXCHANGE COMMISSION WASHINGTON, D.C. 20549 __________________________________ FORM 10-K [ X ] ANNUAL REPORT PURSUANT TO SECTION 13 OR 15(d) OF THE SECURITIES EXCHANGE ACT OF 1934 For the fiscal year ended December 31, 2005 OR [ ] TRANSITION REPORT PURSUANT TO SECTION 13 OR 15(d) OF THE SECURITIES EXCHANGE ACT OF 1934 Commission file number 1-11871 Commodore Applied Technologies, Inc. (Exact Name of Registrant as Specified in Its Charter) Delaware 11-3312952 (State or Other Jurisdiction of (I.R.S. Employer Incorporation or Organization) Identification No.) 150 East 58th Street, Suite 3238 New York, New York 10155 (Address of Principal Executive Offices) (Zip Code) Registrant's telephone number, including area code: (212) 308-5800 Securities registered pursuant to Section 12(b) of the Act: Title of Each Class Name of Each Exchange on Which Registered ------------------- ----------------------------------------- Common stock, par value $0.001 per share NASD Over the Counter Bulletin Board (OTCBB) Securities registered pursuant to Section 12(g) of the Act: Not Applicable Indicate by check mark if the registrant is a well-known seasoned issuer, as defined in Rule 405 of the Securities Act. Yes [ ] No [ X ] Indicate by check mark if the registrant is not required to file reports pursuant to Section 13 or Section 15(d) of the Exchange Act. Yes [ ] No [ X ] Indicate by check mark whether the registrant (1) has filed all reports required to be filed by Section 13 or 15(d) of the Securities Exchange Act of 1934 during the preceding 12 months (or for such shorter period that the registrant was required to file such reports), and (2) has been subject to such filing requirements for the past 90 days. Yes [ X ] No [ ] Indicate by check mark if disclosure of delinquent filers pursuant to Item 405 of Regulation S-K is not contained herein, and will not be contained, to the best of registrant's knowledge, in definitive proxy or information statements incorporated by reference in Part III of this Form 10-K or any amendment to this Form 10-K. [ ] Indicate by check mark whether the registrant is a large accelerated filer, an accelerated filer, or a non-accelerated filer. See definition of "accelerated filer and large accelerated filer" in Rule 12b-2 of the Exchange Act. Large accelerated filer [ ] Accelerated filer [ ] Non-accelerated filer [ X ] Indicate by check mark whether the registrant is a shell company (as defined in Rule 12b-2 of the Exchange Act). Yes [ ] No [ X ] As of March 31, 2006, the aggregate market value of the registrant's common stock held by non-affiliates of the registrant was $1,864,680.19 based upon the last sale price of the common stock on March 31, 2006 as reported by the NASD Over the Counter Bulletin Board. Class Outstanding at April 15, 2006 -------------------------------------------- ------------------------------ [Common Stock, $0.001 par value per share] 7,948,216 shares DOCUMENTS INCORPORATED BY REFERENCE None COMMODORE APPLIED TECHNOLOGIES, INC. ANNUAL REPORT ON FORM 10-K FOR THE FISCAL YEAR ENDED DECEMBER 31, 2005 TABLE OF CONTENTS PART 1............................................................................................................6 ITEM 1. BUSINESS........................................................................................6 General.........................................................................................6 Environmental Management - Commodore Advanced Sciences, Inc.....................................7 Soil Decontamination--Commodore Solution Technologies, Inc.....................................12 Markets and Customers..........................................................................20 Raw Materials..................................................................................22 Backlog........................................................................................22 Research and Development.......................................................................22 Intellectual Property..........................................................................22 Competition....................................................................................23 Environmental Regulation.......................................................................25 Employees......................................................................................26 ITEM 1A. RISK FACTORS..................................................................................27 ITEM 1B. UNRESOLVED SEC STAFF COMMENTS.................................................................36 ITEM 2. PROPERTIES.....................................................................................37 ITEM 3. LEGAL PROCEEDINGS..............................................................................38 ITEM 4. SUBMISSION OF MATTERS TO A VOTE OF SECURITY HOLDERS............................................39 PART II..........................................................................................................41 ITEM 5. MARKET FOR REGISTRANT'S COMMON EQUITY AND RELATED STOCKHOLDER MATTERS AND ISSUER PURCHASES OF EQUITY SECURITIES...............................................................................41 Market Information.............................................................................41 Issuance of Common Stock Subsequent to December 31, 2005.......................................42 Dividend Information...........................................................................42 Recent Sales of Unregistered Securities........................................................44 ITEM 6. SELECTED FINANCIAL DATA.........................................................................48 ITEM 7. MANAGEMENT'S DISCUSSION AND ANALYSIS OF FINANCIAL CONDITION AND RESULTS OF OPERATIONS...........49 Overview.......................................................................................49 Critical Accounting Policies...................................................................50 Results of Operations..........................................................................51 Off-Balance Sheet Arrangements.................................................................53 Quarterly Results of Operations................................................................54 Liquidity and Capital Resources................................................................55 Net Operating Loss Carryforwards...............................................................62 New Accounting Pronouncements..................................................................62 Forward Looking Statements.....................................................................64 ITEM 7A. QUANTITATIVE AND QUALITATIVE DISCLOSURES ABOUT MARKET RISK....................................65 ITEM 8. FINANCIAL STATEMENTS AND SUPPLEMENTARY DATA....................................................65 ITEM 9. CHANGES IN AND DISAGREEMENTS WITH ACCOUNTANTS ON ACCOUNTING AND FINANCIAL DISCLOSURE...........65 ITEM 9A. CONTROLS AND PROCEDURES........................................................................66 ITEM 9B. OTHER INFORMATION..............................................................................66 PART III.........................................................................................................67 ITEM 10. DIRECTORS AND EXECUTIVE OFFICERS OF THE REGISTRANT............................................67 Executive Officers and Directors...............................................................67 Key Employees..................................................................................71 Board Committees...............................................................................71 Audit Committee and Financial Expert...........................................................72 Compensation of Directors......................................................................72 Compliance with Section 16(a) of the Exchange Act..............................................72 ITEM 11. EXECUTIVE COMPENSATION........................................................................74 Summary Compensation...........................................................................74 Stock Options..................................................................................76 Employment Agreements..........................................................................77 Compensation Committee Interlocks and Insider Participation....................................77 Report of the Compensation Committee on Executive Compensation.................................77 ITEM 12. SECURITY OWNERSHIP OF CERTAIN BENEFICIAL OWNERS AND MANAGEMENT.................................81 Equity Compensation Plan Information...........................................................81 Ten Year Option Repricings.....................................................................82 Shareholder Return Performance.................................................................84 Security Ownership of Certain Beneficial Owners................................................85 Security Ownership of Management...............................................................87 ITEM 13. CERTAIN RELATIONSHIPS AND RELATED TRANSACTIONS.................................................90 ITEM 14. PRINCIPAL ACCOUNTANT FEES AND SERVICES.........................................................92 PART IV..........................................................................................................93 ITEM 15. EXHIBITS, FINANCIAL STATEMENT SCHEDULES AND REPORTS ON FORM 8-K................................93 SIGNATURES......................................................................................................103 SUPPLEMENTAL INFORMATION........................................................................................104 Preliminary Note Regarding Certain Risks and Forward-Looking Statements ----------------------------------------------------------------------- This Annual Report on Form 10-K contains "forward-looking statements." These forward-looking statements can generally be identified as such because the context of the statement will include words such as the Company "believes," "anticipates," "expects" or words of similar import. Similarly, statements that describe the Company's projected future results, future plans, objectives or goals or future conditions or events are also forward-looking statements. Actual results are inherently difficult to predict. Any such forward-looking statements are subject to the risks and uncertainties that could cause actual results of operations, financial condition, acquisitions, financing transactions, operations, expenditures, expansion and other events to differ materially from those expressed or implied in such forward-looking statements. Any such forward-looking statements would be subject to a number of assumptions regarding, among other things, future economic, competitive and market conditions generally. Such assumptions would be based on facts and conditions as they exist at the time such statements are made as well as predictions as to future facts and conditions, the accurate prediction of which may be difficult and involve the assessment of events beyond the Company's control. Further, the Company's business is subject to a number of risks and uncertainties that would affect any such forward-looking statements. These risks and uncertainties include, but are not limited to: o the Company's critical need for additional cash to sustain existing operations and meet existing obligations and capital requirements (the Company's auditor's opinion on our fiscal 2002, 2003, 2004 and 2005 financial statements contains a "going concern" qualification in which they express doubt about the Company's ability to continue in business); o the ability to generate profitable operations from a large scale remediation project; o the ability of the Company to implement its waste processing operations, including obtaining commercial waste processing contracts and processing waste under such contracts in a timely and cost effective manner. o the timing and award of contracts by the U.S. Department of Energy for the cleanup of waste sites administered by it; o the acceptance and implementation of the Company's waste treatment technologies in the government and commercial sectors; o the Company's ability to obtain and perform under other large technical support services projects; developments in environmental legislation and regulation; o developments in environmental legislation and regulation; o the ability of the Company to obtain future financing on favorable terms; o other circumstances affecting anticipated revenues and costs; o the expiration of the Company's nationwide EPA permit in September 2001 (The Company believes that the permit may be renewed subject to providing additional information. The Company has not resubmitted information for a new permit); and o the ability of the Company to replicate on a large scale, economically viable basis, the results of its technology test results. These risks and uncertainties could cause actual results of the Company to differ materially from those projected or implied by such forward-looking statements. 5 PART I ------ ITEM 1. BUSINESS ------- -------- GENERAL Commodore Applied Technologies, Inc. (the "Company") is an environmental solutions company offering a range of engineering and technical services to the public and private sectors related to (i) providing services related to, environmental management for on-site and off-site identification, investigation remediation and management of hazardous, mixed and radioactive waste and (ii) remediating contamination in soils, liquids and other materials and disposing of or reusing certain waste by-products by utilizing our Solvated Electron Technology ("SET(TM)"). The Company's corporate mission is to serve the environmental remediation market from its primary operating center to profitably provide government and industry with engineering and remediation solutions to legacy waste environmental problems. Our strategy focuses the Company on the unique and high profit niches of hazardous materials conversion and waste remediation. The Company believes that SET is the only patented, non-thermal, portable and scalable process that is currently available for treating and decontaminating soils, liquids and other materials containing PCBs, pesticides, dioxins, chemical weapons and warfare agents and other toxic contaminants. Demand for our environmental technologies is anticipated to arise principally from the following sources: o Stricter legislation and regulations mandating new or increased levels of air and water pollution control and solid waste management; and o the need for alternative environmental treatment and disposal methods for toxic substances (such as the SET technology), which involve limited safety risks with respect to air pollution and transportation of hazardous materials and do not result in large volumes of residual waste that require further treatment prior to disposal. Our business strategy is to expand our environmental technologies businesses by: o establishing additional collaborative joint working and marketing arrangements with established engineering and environmental service organizations to pursue commercial opportunities in the public and private sector; and o implementing the SET technology in selected niche markets within certain strategic environmental market segments, such as government mixed waste remediation and chemical weapons demilitarization. 6 The Company currently has identified two operating segments. These two segments are as follows: Commodore Advanced Sciences, Inc., which primarily provides various engineering, sampling, and public relations services to Government agencies on a fixed rate and lump sum basis; and Commodore Solutions, Inc., which is commercializing technologies to treat mixed and hazardous wastes. The Company currently requires additional cash to sustain existing operations and to meet current obligations and ongoing capital requirements. The Company's current monthly operating expenses exceed cash revenues by approximately $80,000 at December 31, 2005. The report of our independent registered public accounting firm on our fiscal 2003, 2004 and 2005 consolidated financial statements contains a "going concern" qualification in which they express substantial doubt about our ability to continue in business. Additional information regarding the business of each segment is set forth below, and the information in Note 16 to the Company's Consolidated Financial Statements included in this Annual Report on Form 10-K is incorporated into this Part I by reference. The Company was incorporated in Delaware in March 1996. As used in this Annual Report, and except as the context otherwise requires, the "Company" means Commodore Applied Technologies, Inc. and its subsidiaries, including Commodore Solutions, Inc., Commodore Government Environmental Technologies, Inc., and Commodore Advanced Sciences, Inc. The Company's principal executive offices are located at 150 East 58th Street, Suite 3238, New York, New York 10155, and its telephone number at that address is (212) 308-5800. ENVIRONMENTAL MANAGEMENT--COMMODORE ADVANCED SCIENCES, INC. The Company, through Commodore Advanced Sciences, Inc. ("Advanced Sciences"), provides specialized technical and project management products and services primarily to government-sector customers, including the Department of Energy ("DOE") and the Department of Defense ("DOD"), and also to private-sector domestic and foreign industrial customers. Advanced Sciences engages in all aspects of environmental regulation and compliance, as well as access to leading technologies and innovative skills related to the identification, investigation, remediation and management of hazardous, mixed and radiological waste sites. Advanced Sciences currently operates a network of three offices located in three states, with its principal executive offices located in Richland, Washington. The Company's strategy in acquiring Advanced Sciences in 1996 was to incorporate its process technology into the products and services offered to Advanced Sciences' customers, with a view to increasing the quality and scope of services offered and providing the Company with a broader customer base for its technology. Services Environmental Services. Advanced Sciences is a nationwide firm specializing in environmental engineering and technical support and waste management. Advanced Sciences was acquired by the Company in 1996 and is headquartered in Richland, Washington. Advanced Sciences operates out of three offices across the country, and qualifies as a small business under seven NAICS 7 codes. Advanced Sciences employs over 30 professionals who are expert in providing environmental sample collection, transportation, and analyses, meeting rigorous quality assurance requirements for data validation, while performing in accord with equally rigorous personnel health and safety requirements. Advanced Sciences currently has ten commercial analytical laboratories under contract to provide environmental sample analyses in support of regulatory compliance and industrial hygiene. Advanced Sciences' record of program management and technical services include: - Environmental Site Restoration Planning - D & D Planning & Implementation Support - Preliminary Assessments/Site Investigations - Waste Minimization - Environmental Audits & Assessments - Health & Safety Oversight & Planning - Underground-Storage-Tank Site Investigation - Biological Sampling and Characterization - Environmental Impact Assessments & Statements & Remediation - Structural Engineering Analysis - Remedial Investigations/Feasibility Studies - Deconstruction Planning - Environmental Pollution Control - Regulatory Compliance - Hazardous, Radioactive, Toxic & Mixed-Waste - Federal & State Agency Coordination Management Including Treatment - Public Involvement Support - Hazardous Waste Site Remediation The two most significant clients Advanced Sciences has had over the past 10 years have been the Department of Defense (DOD) and the Department of Energy (DOE), while also providing services to private industry. Advanced Sciences' largest office provides environmental characterization and management, building decontamination and decommissioning (D&D), environmental protection, remediation, restoration, safety & health, and environmental regulatory compliance for the Department of Energy's Oak Ridge Complex. Advanced Sciences has 31 technical staff, all extensively trained in proper procedures for handling multifarious waste materials and environmental media. Advanced Sciences' technical staff have more than 500 years of combined experience performing environmental and waste sampling tasks. Ten of our personnel hold DOE security clearances. All Advanced Sciences' sampling personnel maintain currency in the following minimum training requirements: o OSHA 40-hour Hazardous Waste Operations and Emergency Response (HAZWOPER) o OSHA 8-hr Annual HAZWOPER Refresher o OSHA HAZWOPER Supervisor o Hazard Communication (HAZCOM)/Hazardous Materials Information System (HMIS) training o Radiation Worker II 8 o First Aid/CPR o Annual Medical Monitoring o Respirator Fit Testing o General Safety o Hazardous Energy Control (Lockout/Tagout) o Work Control Process o Excavation/Penetration Permit o Construction Equipment Inspection & Maintenance Program o Hotwork (welding safety) o Confined Space Program o Asbestos and Other Fibrous Materials o Chronic Berylium Disease Prevention o IATA Dangerous Good Awareness Certificate o Workplace Substance Abuse Prevention Program participation From 1996-2002, Advanced Sciences performed waste characterization sampling and decontamination and decommissioning (D&D) support sampling in compliance with RCRA and CERCLA requirements. The Advanced Sciences' Sample Team operated in the most hazardous locations at Rocky Flats--highly contaminated radioactive and hazardous areas, including glove boxes, confined-space conditions, and poisonous atmospheres--with zero lost-time accidents or injuries. The Advanced Sciences' Sample Team was in compliance with all Occupational Safety and Health Act of 1970 (OSHA), U. S. Environmental Protection Agency (EPA), and DOE requirements, including conduct of operations, nuclear/criticality safety, waste generator/certification, and material handling/safety requirements. From 1996-2002, Advanced Sciences performed the Rocky Flats Environmental Technology Site (RFETS) site-wide surface water sampling program, which included collection of year-round daily samples from streams, ponds, and the site Sewage Treatment Plant (STP) in compliance with the National Pollutant Discharge Elimination System (NPDES) Permit. Advanced Sciences' personnel also collected drinking water, sediment, and soil samples for Safe Drinking Water Act of 1974 (SDWA) and Rocky Flats Cleanup Agreement (RFCA) compliance. From 1996 to present, Advanced Sciences' water resources personnel have managed and performed the Chatfield Basin Water Quality Monitoring Program involving all major and minor tributaries of the South Platte River in the Chatfield Basin Watershed, as well as water quality monitoring of Chatfield Reservoir, located southwest of Denver, CO. Data are reported monthly to the Chatfield Watershed Authority and annually to the U. S. Army Corps of Engineers (USACE) and the state of Colorado Water Quality Control Commission (WQCC). Advanced Sciences has procured and managed all analytical services for this project, involving five different laboratories per year. Advanced Sciences personnel perform laboratory audits, resolution of data quality objective (DQO) and QA issues, data management and reporting, and accruals and invoicing involving the labs. Remediation Services. Having already established a market position in the consulting and front-end analysis phase, Advanced Sciences is poised to follow market demand into remediation services. After an environmental problem is identified, Advanced Sciences offers alternative remediation approaches that may involve providing on-site waste containment or management of 9 on-site/off-site remediation and waste removal. Advanced Sciences can also redesign its customers' ongoing production processes and develop engineering plans and technical specifications to minimize or eliminate the generation of hazardous waste. The Company believes that Advanced Sciences' integration of engineering and environmental skills, plus its access to innovative technologies, provide Advanced Sciences with a competitive advantage in redesigning production processes. Technical Services. New technologies play a critical role in both the remediation of existing waste sites and in the reduction of waste generated by ongoing production processes. Advanced Sciences has access to the SET technology and all its derivatives. Additionally, Advanced Sciences has access to the Supported Liquid Membrane ("SLiM(TM)") technology held by Commodore Separation Technologies, Inc. ("Separation"). This technology has the ability to selectively extract heavy metals and radioactive nuclides from liquids and gasses. The SLiM technology is held in an 85% owned subsidiary of Commodore Environmental Services, which owns 4.95 % of the Company. Advanced Sciences has at its disposal, on a per project basis, what it believes are among the most qualified professionals in the environmental consulting business. Advanced Sciences' scientists have participated on national boards for risk assessment and quality assurance, were instrumental in the development of environmental regulations for the DOE and the DOD, and have served as expert witnesses before the U.S. Congress and the Nuclear Regulatory Commission. To maintain its competitive position, Advanced Sciences intends to continue to develop viable remediation technologies and attract and retain qualified personnel. Contracts EDAM - Advanced Science was awarded an Environmental Data Acquisition and Management contract ("EDAM") by Bechtel Jacobs Company LLC of Oak Ridge, TN ("BJC") in September 2004. Advanced Sciences is the lead small business member of the Commodore Advanced Sciences Team ("CAST"), which also includes team members Science Applications International, Inc. (SAIC), and RCS Corporation (RCS). CAST is currently performing and managing the EDAM contract. This is a 4-year, $21 million contract that includes sampling, sample management, and data management of environmental surveillance and regulatory compliance data. EDAM is a program that supports nearly all of DOE-OR environmental monitoring and accelerated site closure activities. This program is continuously monitored and audited for safety, quality, productivity, efficiency, and value to BJC and DOE-OR. As part of the routine performance of this contract, CAST coordinates work with multiple organizations, including other BJC Subcontractors such as: o Safety and Ecology Corporation for radiological control support, o Duratek Federal Services for Y-12 Surveillance and Maintenance Program maintenance and Environmental Management Waste Management Facility (EMWMF) monitoring, o other samplers (e.g., Biological Monitoring and Abatement (BMAP) samplers at Oak Ridge National Laboratory (ORNL), BWXT samplers), o Y-12 National Security Complex Waste Operations, and o WesKem, LLC, and other Decontamination & Decommission contractors on Site Closure projects. 10 Sampling activities under the EDAM contract include collection of multiple sample types from hundreds of monitoring locations and packaging and shipping of samples to appropriate analytical laboratories for analysis. Locations and environments include abandoned burial grounds and hazardous waste sites, fields and forests, streams, lakes, and ponds. Sampling tasks support a variety of ongoing monitoring programs, including the Water Resource Restoration Program (WRRP) to determine the effectiveness of remedial actions conducted under CERCLA and the ETTP Environmental Monitoring Program. Regulatory compliance data acquisition and management projects include Resource Conservation and Recovery Act (RCRA) and National Pollution Discharge Elimination System (NPDES) permit compliance, the Biological Monitoring and Abatement Program, and Stormwater Pollution Prevention Program (SWPPP) activities. All of these compliance sampling programs are closely monitored by regulators, stakeholders, BJC, and DOE-OR. Advanced Sciences maintains a daily log of all sampling and inspection activities, and formal records of all monitoring and inspection activities. CAST has subcontracted laboratories participating in the DOE Consolidated Audit Program (DOECAP) to provide acceptable data from both chemical and radiological analyses within the client's requested timeframe. Subcontracts have also been established with laboratories capable of performing biological species identification and enumeration. The Company believes the EDAM contract may attract more DOE client groups than are contemplated in the base scope of the contract. The Company is seeking to extend its environmental monitoring service capabilities to other DOE sites, such as Portsmouth, OH and Paducah, KY. The current contract backlog for work is $9.7 million in 2006. Duratek- Advanced Sciences was awarded a one-year contract from Duratek Federal Services, Inc. beginning in January 2005, which was renewed in January 2006 for an additional one-year period, to perform environmental monitoring services at two engineered landfills on the Oak Ridge Reservation. Environmental monitoring services will include sample collection, packaging and shipping to offsite analytical laboratories. Samples will be collected from surface water, groundwater, and landfill leachate collection locations on storm event, weekly, monthly, and quarterly bases. UT Battelle: Advanced Sciences provides one engineering person on a time and material basis to UT Battelle, supporting the site closure at Oak Ridge National Laboratories (ORNL). The Advanced Sciences personnel provide structural engineering assessment services under this contract. The time and material contract remains on-going through 2006. Denver Regional Water Council of Governments: Advanced Sciences is contracted annually to sample surface waters, streams, groundwater wells and watersheds to Chatfield Watershed Authority located southwest of Denver. The contract is ongoing through 2006. A similar and ongoing contract for Cherry Creek Basin Water Authority is also ongoing. Tetra Tech Contract: Advanced Sciences provides engineering support under Tetra Tech's general engineering support contract with Bechtel Jacobs Co, LLC. Bechtel Jacobs is responsible for environmental oversight of the U.S. DOE's Oak Ridge, TN site. Advanced Sciences provides 1 to 3 engineering personnel on a time and material basis to Tetra Tech on a contract basis which is expected to continue through June 30, 2006. 11 WESKEM - Advanced Sciences was awarded a one-year contract in March 2005 from WESKEM LLC., of Oak Ridge to support their sampling efforts with the Waste Disposition Services Project. The Sample Management Office (SMO) services required to meet the needs of this project are: (i) Assistance with the preparation of analytical statement of works (SOW), (ii) Maintenance of laboratory performance metrics, (iii) Procurement of best value laboratories, (iv) Performance of contract verification of data, and (v) Tracking of samples and sample residue. This contract is ongoing and has been extended through September 2006. Joint Ventures Nuvotec, Inc., Joint Venture. In April 2002, Commodore Government Environmental Technologies, Inc. ("Government Technologies"), a wholly-owned subsidiary of the Company, entered into a LLC agreement with Technical Resources International, Inc., ("TRI"), a wholly owned subsidiary of Nuvotec, Inc., as a non-exclusive means by which each party (and their affiliates) could pursue mixed waste treatment contracts on a limited, domestic basis. TRI is a provider of contract services to the DOE and to the public utilities market. The purpose of the joint venture, known as Nuvoset, LLC (the "Nuvoset LLC"), a Delaware limited liability company, encompassed all aspects of mixed waste characterization, treatment, storage, transportation and disposal through the use, application and commercialization of the technologies of the Nuvotec LLC partners. The Nuvoset, LLC was dissolved in 2003 by agreement between the parties. SOIL DECONTAMINATION--COMMODORE SOLUTION TECHNOLOGIES, INC. The Company, through Commodore Solutions, Inc. ("Solutions"), has developed and has commercialized its patented process known as SET. Based on the results of its extensive testing and commercial processing activities, the Company believes that SET is capable of effectively treating and decontaminating soils and other materials, including sludges, sediments, oils and other hydrocarbon liquids, metals, clothing and porous and non-porous structures and surfaces, by destroying PCBs, pesticides, dioxins, chlorinated substances and other toxic contaminants to an extent sufficient to satisfy current federal environmental guidelines. The Company also believes that, based on the results of additional tests, SET is capable of neutralizing substantially all known chemical weapons materials and warfare agents, explosives and concentrating certain radioactive wastes for more effective disposal. The Company's smallest SET systems are bench scale, capable of treating materials in up to one kilogram quantities utilized in laboratory tests and feasibility studies. This equipment has been shipped to third party facilities with permits to receive and test radioactive materials, such as Mountain States Analytical Laboratories. In 1995 the Company constructed two mobile, trailer mounted treatment systems. These systems are capable of being mobilized to waste sites and operated to test SET's applicability at actual waste sites, such as New Bedford Harbor, MA and Port Hueneme, CA. The Company's first pilot scale system, the S/4, was constructed in 1995. It was used to test larger masses of heterogeneous contaminated materials, up to 500 pounds per batch. In December 1995, the Company received its first commercial contract for application of the SET technology. The Company teamed with Ionics RCC in Bellevue, WA to apply their combined processes to the potential remediation of 18,000 cubic yards of PCB contaminated sediments dredged from the Acushnet River and stored at the New Bedford Harbor Superfund Site. Ionics RCC's B.E.S.T. 12 process solvent-extracted contaminants from the sediments, leaving a highly contaminated heavy residue which was successfully treated by SET. The residue contaminants included PCBs with levels as high as 70,000 ppm, as well as dibenzodioxins and dibenzofurans with toxic equivalents as high as 35,000 ppt. The tests were performed as part of a treatability study to determine which of three alternatives were more economically feasible - thermal desorption, vitrification, and the Company's SET process. Foster Wheeler Environmental Corporation, who conducted the tests at the site for EPA, concluded in its formal report that SET was effective and more economical than the other processes. In early 1996, the Company began construction of its first commercial scale SET system, the L1200, at a previously rented facility in Marengo, Ohio. This machine is capable of treating 1200 gallons of contaminated liquids per day. In July, 1997, this machine was demonstrated to EPA as a chemical destruction system for PCBs. In the tests conducted, waste oils contaminated with PCBs at levels exceeding 20,000 ppm were consistently rendered non-detectable for PCBs. The nationwide EPA operating permit was issued for this machine as a result of the test program. Two of these units have been constructed. In September 1996, the Company's SET technology was selected as one of ten innovative technologies to participate in the Department of Commerce's Rapid Commercialization Initiative. The Department of Defense provided a test site at the Navy Construction Battalion base at Port Hueneme, CA. Various test matrices from several facilities around the world were provided for SET processing. Included were materials contaminated with pesticides and PCBs, as well as activated charcoal - the by-product of a soil washing process. The Company mobilized its mobile 15 liter reactor system (CMDU2) to the site, and was successful in treating six solid matrix waste streams. In September 1997, the Department of Energy ("DOE") contacted the Company regarding a application of the SET process at its Weldon Spring Superfund Site near St. Louis, MO. Through its Project Management Contractor, MK-Ferguson, the Company was contracted to treat 40 drums of materials contaminated with PCBs, pesticides, uranium/thorium, and various RCRA materials including MEK, benzene, TCE, and TCA. The Company mobilized its S/4 unit to the Weldon Spring site and successfully treated this material to CERCLA requirements for on site land disposal. During the project, in late March of 1998, Commodore once again successfully demonstrated the process to EPA. In 1999 the Company constructed a mobile system capable of treating many matrices in up to 100 pound batches; the SL-2. It was specifically designed and built as a stand alone skid mounted system, requiring only electrical hookup for operation enabling the SL-2 to may be shipped in sea land containers or on a single truck. This system has operated at three rad/RCRA/TSCA permitted facilities, successfully treating low-level mixed wastes. In 1999 the Company introduced its largest current commercial SET system, the S-10, capable of treating various matrices in batch sizes of up to 3,500 pounds with throughputs up to 1 ton per hour. The S-10 was first used to treat PCB contaminated soils for a Department of Defense ("DOD") site in Harrisburg, Pennsylvania (project completed in July, 2001). 13 In October 1999 the Company's SL-2 treatment system was shipped to the Rad/RCRA/TSCA permitted Waste Control Specialists LLC site near Andrews, TX, where it successfully treated Freon still bottoms and other miscellaneous matrices, including NaK, that were also contaminated with LLRW. This was a commercial application, resulting in the removal of RCRA components such that over 4,000 pounds of treated materials could be subsequently buried at the Envirocare Utah facility. In February 2000 the Company's SL-2 treatment system was utilized in a treatability study at the Envirocare Utah facility. The solid waste provided for the treatability study contained low-level radioactive sludge contaminated with RCRA listed halocarbons. The SET process was very effective in removing the RCRA materials to sub-ppm quantities, well below regulatory levels for land disposal. The SET process was commercialized during the calendar year 2000. In May 2000, the Company mobilized its S-10 system to Harrisburg, Pennsylvania to begin processing PCB contaminated soils at the Pennsylvania Air National Guard's base located at the Harrisburg International Airport (the "Initial Harrisburg Contract"). The Company completed the contract in July 2001, remediating approximately 340 tons of excavated soils to levels deemed unregulated for disposal by the U.S. Environmental Protection Agency (the "EPA"). The Company believes this is the first time a non-thermal process has treated PCB-contaminated soils to levels allowing them to be replaced in the original excavation. Additionally, the Company performed several treatability studies for third party customers during 2000, as well as continued internal testing and process development. At Envirocare of Utah ("Envirocare"), the SET process successfully treated water treatment sludge from a waste stream provided by the Brookhaven National Laboratory (the "Envirocare Study"). Under current, non-Commodore technology treatment processes at Envirocare, this waste could not be treated to meet land disposal regulation requirements. The waste stream was a laboratory mixed waste (radioactive) sludge, contaminated with lead and high levels of RCRA organic compounds. The Envirocare Study waste contained the hazardous waste codes F001, F003, F005, and D008. The Envirocare Study waste stream also contained high water content, approximately 75%. The Company successfully treated the material such that it was suitable for land disposal. The results of the Envirocare Study were presented to the participants of the Waste Management Conference in Tucson, Arizona in February 2001. In the case of third party treatability studies, customer location processing and new patent data set construction, all tests and processing results were verified by independent laboratories agreed upon by the Company and/or the respective client. In the case of internal Company process development testing, results were verified with Company owned analytical equipment in addition to periodic independent off-site testing. In January 2001 the Company entered into a contract with Waste Control Specialists, LLC ("WCS") for the treatment of various mixed waste streams stored at the WCS facility near Andrews, Texas. This work employed the Company's SL-2 SET system and was completed in August 2001. No large scale waste treatment was performed at this site. The contract was terminated by the Company because of the failure of WCS to obtain a waste treatment permit in a timely manner in 2003 and all of the Company's SET equipment was removed from the WCS site. In November 2001 the Company entered into a contract with American Ecology Recycle Center ("AERC", Oak Ridge, Tennessee) for the treatment of 32 drums of Freon still bottom mixed wastes, as well as consultation regarding the regulatory requirements for the treatment. Work commenced in November, employing the Company's SL-2 SET system, and was essentially completed in 2002. As an 14 adjunct to that work, the Company entered into a contract with the University of California (prime contractor for the Department of Energy's Los Alamos National Laboratory) in March 2002 to dispose approximately 12,000 pounds of activated sodium remaining from tests involving the Clinch River Breeder Reactor performed by Rensselaer Polytechnic Institute twenty five years ago. The Company believes this is the first time activated sodium (Na22) has been employed as a reactant to treat other regulated waste materials (the AERC still bottoms). In July 2002 the Company acquired all the SET equipment formerly associated with Teledyne-Commodore LLC. The Company plans to utilize this equipment for treating Department of Energy ("DOE") legacy mixed waste materials for disposal at major DOE sites in the United States. The Company has not utilized this equipment to date. In October 2003 the Company entered into a contract with ToxCo Metals, ("ToxCo"), Oak Ridge. Advanced Sciences, teamed with ToxCo, was performing sodium disposition for the Department of Energy at ToxCo's facility in Oak Ridge, Tennessee. This contract commenced late in 2003, and was expected to be completed late in 2004. The DOE canceled the contract in late 2004 because they determined that the sodium was subject to the Secretary of Energy's moratorium on releasing scrap metals for recycling. In December 2003 the Company entered into a contract with Envirocare of Utah ("Envirocare"), Clive, Utah for the treatment of mixed wastes, as well as consultation regarding the regulatory requirements for the treatment. Preliminary feasibility testing commenced in March 2004, employing the Company's SL-2 SET system. The Company is hopeful this may result in the first multi-year installation and contract for the SET technology but no commercial work has resulted to date. The Company has generated aggregate revenues of less than $1,600,000 from the implementation of the SET technology since 1999. The SET Technology Beginning in the early 1980's, a small research and development company, A. L. Sandpiper Corporation, began experimenting with solvated electron solutions using a different approach from that applied in laboratories for decades. In addition to the usual surrogates and spiked laboratory materials, Sandpiper also obtained and experimented with actual contaminated soil samples using bench scale metal pressure vessels. Sandpiper improved the process, discovered that it could be applied to many recalcitrant remediation problems, and obtained several U.S. patents for the application of solvated electron solutions (the "SET" technology) to environmental cleanup. Sandpiper was acquired by Commodore Environmental Services, Inc., in 1993. Since then Commodore Environmental Services and Commodore Applied Technologies have invested additional resources in the technology, developing it into commercial application. The process is based upon a chemical phenomenon discovered by Sir Humphrey Davy in 1865, shown below for the liquid phase of a sodium and potassium solution: Na(0) + K(0) NH(3) Na+ + K+ + 2e - (the solvated solution) 15 The solution has been called solvated electrons since the dissolved metal releases electrons to the solution in huge numbers. These electrons, also know as free radicals, are the most powerful reducing agents known, quickly reacting with many compounds. Most of the alkali metals readily dissolve in anhydrous ammonia releasing their valance electrons into the ammonia in a relatively rare but stable state unassociated with any atom. In this state, both the electrons and the metal atoms are available to react with other elements and compounds. The SET technology, which is based upon solvated electron chemistry, mixes anhydrous liquid ammonia and/or other similar solvents with reactive metals and contaminated elements to effect the selective destruction or neutralization of organic compounds (such as PCBs, pesticides and dioxins). The Company has demonstrated that SET can achieve consistently high levels of contaminant destruction when working with PCBs, dioxins and pesticides. SET has treated soils containing up to 10,000 ppm of contaminants, and oils containing up to 250,000 ppm, leaving residual soils and oils with contamination levels of less than one ppm. In addition, SET has been successfully applied to other PCB-contaminated surfaces such as concrete. The SET process can be used in conjunction with selected post-treatment processes such that no hazardous or toxic residues will result from the use of SET, nor will there be any toxic emissions into the air, water, soils or other surfaces. For example, most contaminated soils treated with SET can (subject, in some instances, to re-blending the soil with organic matter) be used subsequently for planting or for any other use for which non-contaminated soils are appropriate. Equipment utilized in the SET process consists of tanks, pumps and piping to handle anhydrous ammonia and other solvents in liquid and vapor forms, and treatment vessels for holding contaminated materials and for the introduction of solvating solutions. The system can be transported to field sites and configured in numerous sizes. The SET process requires placing the contaminated materials into a treatment vessel where they are mixed with a solvent and charged with a base metal (e.g. sodium). The chemical reaction produces metal salts such as calcium chloride, calcium hydroxide and non-halogenated inert organics. The ammonia within the treatment vessel is then removed to a discharge tank for later reuse. The materials are removed, sampled for residual traces of PCB or other halogenated organic compounds, and placed in storage for disposal. In many cases, the decontaminated soil and metals can be replaced in their original location, recycled or reused. The solvents do not enter the chemical reaction, but merely serve as dissolving liquids for the solvated electron solution. Operational Characteristics. Substantially all existing systems in use for the destruction of PCBs and other halogenated compounds involve incineration or other thermal processes, and either the permanent installation of highly complex and expensive incinerators and waste disposal equipment at the affected site, or the removal of contaminated materials to off-site facilities. The Company believes that SET represents an approach to resolving serious environmental remediation issues that does not create or entail the safety risks of air pollution and transportation of hazardous materials. The Company believes that SET is more effective than incineration and other destruction processes for toxic substances in that: o SET does not emit toxic fumes into the atmosphere, as is sometimes the case with thermal or incineration methods; 16 o SET is portable and can be moved directly to the contaminated site, thereby reducing the risk of off-site contamination; o SET equipment can be customized and configured to address various treatment applications; o SET's reaction time is substantially less than that of alternative processes, such as thermal destruction and other forms of chemical treatment; o SET equipment can be installed and operated inside industrial plant facilities to treat hazardous wastes on line as a continuation of the manufacturing process; o SET, when used to treat soils, yields nitrogen-enriched soils that can be reused on-site, avoiding replacement and the post-treatment costs of off-site disposal; and o SET has been shown to neutralize or destroy all chemical weapons material and warfare agents in the United States stockpile, and Lewisite (the primary chemical weapons material and warfare agent of the former Soviet Union), in tests conducted by an independent, federally certified surety laboratory. The Company believes that SET is the only technology currently available that possesses all of these features and is capable of treating a wide variety of contaminants. The above characteristics (non-thermal, no air emissions, mobile) are particularly applicable when dealing with mixed waste. Wastes that contain radioactive material and hazardous waste regulated by RCRA and TSCA are particularly difficult to treat and have extremely limited disposal options. By applying the SET process to remove the RCRA and TSCA components, leaving only radioactive waste material, disposal options expand. SET not only removes the hazardous components but also does so by an efficient, non-thermal process that can control and contain the radioactive material so that it remains in the treated material and does not enter the environment in an uncontrolled fashion. EPA Nationwide Permit. In order to treat PCBs within the United States on all non-Superfund sites, a treating entity must obtain a permit from the EPA. Most EPA permits granted to date for PCB destruction are solely for single-site incineration treatment centers. In August 1995, SET was demonstrated to the EPA in order to obtain the Nationwide Permit, which was issued to the Company in March 1996. The permit authorized treatment of soils at contamination levels greater than 1,000 ppm PCBs, and also authorized treatment of miscellaneous metallic materials. Commodore's initial EPA Nationwide Permit was the first (and only) to be issued for nationwide use as a totally enclosed, non-thermal, chemical destruction process for PCB contaminated organic material. The test results, confirmed by EPA's contract program laboratory, indicated organics contaminated with weathered PCBs exceeding 5,000 ppm, were treated to non-detect levels of PCBs. In addition to soil treatment, the Nationwide Permit allows the Company to treat PCB contaminated metallic surfaces and waste oils, as well as wastewater (the wastewater is treated by a non-SET process). The Company has also successfully demonstrated SET as a treatment process for organic materials contaminated with PCBs and radionuclides and has received a draft revised EPA permit for these matrices. This permit revision covers the destruction of PCBs in soils, waste oils, organic materials, water, and on metallic surfaces. 17 The Nationwide Permit expired in September 2001, and may be renewed subject to providing any requested additional information to the EPA at the time of renewal. Based on currently published lists of EPA national operating permits, the Company believes that it possesses the only non-thermal PCB treatment technology for multiple applications permitted under the EPA's Alternate Destruction Technology Program. EPA regulations governing permitting have been in effect for more than 15 years, and according to the latest EPA published list of non-thermal destructive processes, only seven companies have met EPA's stringent requirements for commercial operation. Of these, only the Company is permitted for the chemical destruction of such a wide range of PCB contaminated materials. The EPA's Alternative Destruction Technology Program is designed to encourage remediation technologies as an alternative to incineration. Test Results. The Company has performed treatability studies and actual commercial applications of the SET process that have resulted in successful treatment of over 120 regulated compounds. In more than 1,500 tests using SET, various high levels of contaminants, including PCBs, were reduced to levels approaching non-detectable with the destruction process occurring in a matter of minutes. The Company has performed various treatability studies and processed commercial quantities of waste utilizing the SET process. This activity has resulted in the successful treatment of over 120 regulated compounds. Additionally, the Company has conducted several thousand tests of the SET technology on limited quantities of contaminated material, and there can be no assurance that SET will be able to replicate any of these test results on a large-scale commercial basis or on any specific project. The following test results of the Company's SET technology are provided below from the analytical results from several of the treatability studies and commercial applications mentioned above. Destruction of Organics by the SET Technology in Various Solid Materials ----------------------------- --------------- ----------------------- --------------------- ------------------ Pre Treatment Post-Treatment Source of Material Analyte Material Type (mg/kg) (mg/kg) ----------------------------- --------------- ----------------------- --------------------- ------------------ Harrisburg, PA PCB Sand, clay 777 <1.0 ----------------------------- --------------- ----------------------- --------------------- ------------------ Los Alamos, NM PCB Sand, silt, clay 77 <2.0 ----------------------------- --------------- ----------------------- --------------------- ------------------ New York PCB Sand, silt 1,250 <2.0 ----------------------------- --------------- ----------------------- --------------------- ------------------ Monroe, LA PCB Sand, silt, clay 8.8 <1.0 ----------------------------- --------------- ----------------------- --------------------- ------------------ Hawaii PCB Volcanic Soil 102 0.2 ----------------------------- --------------- ----------------------- --------------------- ------------------ North Island Naval Shipyard PCB Activated Carbon 512 0.93 ----------------------------- --------------- ----------------------- --------------------- ------------------ ConTech PCB Solid Resin 1,212 0.5 ----------------------------- --------------- ----------------------- --------------------- ------------------ New Bedford, MA PCB Sludge 32,800 1.3 ----------------------------- --------------- ----------------------- --------------------- ------------------ New Bedford, MA Dioxin Sludge .04 ND ----------------------------- --------------- ----------------------- --------------------- ------------------ Dahlgren, VA DDD Clay 15 <.02 ----------------------------- --------------- ----------------------- --------------------- ------------------ Weldon Spring, MO TCE Corn cob 6,400 <0.5 ----------------------------- --------------- ----------------------- --------------------- ------------------ Weldon Spring, MO PCB Metal Capacitors 5.6 <0.2 ----------------------------- --------------- ----------------------- --------------------- ------------------ Los Alamos RDX Soil 3,850 <1.0 ----------------------------- --------------- ----------------------- --------------------- ------------------ Eastern Utility TCE Soil 48,000 0.5 ----------------------------- --------------- ----------------------- --------------------- ------------------ 18 Compounds Successfully Treated by SET Technology ---------------------------------------------- ------------------------------------------- -------------------------------------- 1,1,1-Trichloroethane bis(2-Chloroethyl)ether m-Dichlorobenzene ---------------------------------------------- ------------------------------------------- -------------------------------------- 1,1,2-Trichloro-1,2,2-trifluoroethane bis(2-Chloroisopropyl) ether Methoxychlor ---------------------------------------------- ------------------------------------------- -------------------------------------- 1,1-Dichloroethane Bromacil Methylethyl ketone ---------------------------------------------- ------------------------------------------- -------------------------------------- 1,1-Dichloroethylene Bromodichloromethane Methylisobutyl ketone ---------------------------------------------- ------------------------------------------- -------------------------------------- 1,2-Dinitrotoulene Bromomethane/Methylbromide Methyl methacrylate ---------------------------------------------- ------------------------------------------- -------------------------------------- 1,2,3,5-Tetrachlorobenzene Butyl alcohol Methylethyl ketone ---------------------------------------------- ------------------------------------------- -------------------------------------- 1,2,3-Trichloropropane Butyl benzyl phthalate Naphthalene ---------------------------------------------- ------------------------------------------- -------------------------------------- 1,2,4-Trichlorobenzene Carbofuran phenol Nitrobenzene ---------------------------------------------- ------------------------------------------- -------------------------------------- 1,2-Dibromoethane/Ethylene dibromide Carbon disulfide o-Dichlorobenzene ---------------------------------------------- ------------------------------------------- -------------------------------------- 1,2-Dichloroethane Carbon tetrachloride o-Nitroaniline ---------------------------------------------- ------------------------------------------- -------------------------------------- 1,2-Dichloropropane Chlorobenzene o-Nitrophenol ---------------------------------------------- ------------------------------------------- -------------------------------------- 1,4 Dioxane Chlorobenzilate p-Chloroaniline ---------------------------------------------- ------------------------------------------- -------------------------------------- 2,4,5-Trichlorophenol Chlorodane p-Chloro-m-cresol ---------------------------------------------- ------------------------------------------- -------------------------------------- 2,4,5-Trichlorophenoxyacetic acid/2,4,5-T Chlorodibromomethane p-Dichlorobenzene ---------------------------------------------- ------------------------------------------- -------------------------------------- 2,4,6-Tribromophenol Chloroethane p-Dimethylaminoazobenzene ---------------------------------------------- ------------------------------------------- -------------------------------------- 2,4,6-Trichlorophenol Chrysene Pentachlorobenzene ---------------------------------------------- ------------------------------------------- -------------------------------------- 2,4-Dichlorophenoxyacetic acid/2,4-d cis-1,3-Dichloropropylene Pentachlorophenol ---------------------------------------------- ------------------------------------------- -------------------------------------- 2,4-Dinitrophenol Cresols PETN ---------------------------------------------- ------------------------------------------- -------------------------------------- 2,4-Dinitrotoluene Dalapon Phenanthrene ---------------------------------------------- ------------------------------------------- -------------------------------------- 2,6-Dichlorophenol DDD p-Nitroaniline ---------------------------------------------- ------------------------------------------- -------------------------------------- 2,6-Dinitrotoluene DDE Polychlorinated biphenyls (all) ---------------------------------------------- ------------------------------------------- -------------------------------------- 2-Chloro-1,3-butadiene DDT Pyrene ---------------------------------------------- ------------------------------------------- -------------------------------------- 2-Chloroethyl vinyl ether Decamba Silvex/2,4,5-TP ---------------------------------------------- ------------------------------------------- -------------------------------------- 2-sec-Butyl-4,6-dinitrophenol/Dinoseb Dibenzo(a,h)anthracene Tetrachloroethane ---------------------------------------------- ------------------------------------------- -------------------------------------- 3-Methylcholoanthrene Dibromomethane Tetrachloroethylene ---------------------------------------------- ------------------------------------------- -------------------------------------- 4,4-Methylene bis (2-chloroaniline) Dichlorobenzene Tetryl ---------------------------------------------- ------------------------------------------- -------------------------------------- 4,6-Dinitro-o-cresol Dichlorodifluoromethane Toxaphene ---------------------------------------------- ------------------------------------------- -------------------------------------- 4-Bromophenyl phenylether DieldrinTetrachlorobenzene trans-1,2-Dichloroethylene ---------------------------------------------- ------------------------------------------- -------------------------------------- 5-Nitro-o-toluidine Dioxins (all) trans-1,3-DichloropropyleneDieldrin ---------------------------------------------- ------------------------------------------- -------------------------------------- Acenaphthene Ethylbenzene Tribromomethane/Bromoform ---------------------------------------------- ------------------------------------------- -------------------------------------- Acenaphthlene Fluoranthene Trichloroethane ---------------------------------------------- ------------------------------------------- -------------------------------------- Anthracene Freon (all) Trichloroethylene ---------------------------------------------- ------------------------------------------- -------------------------------------- Atrazine Furans (all) Trichlorofluoromethane ---------------------------------------------- ------------------------------------------- -------------------------------------- Benomyl Halons (all) tris-(2,3-Dibromopropyl) phosphate ---------------------------------------------- ------------------------------------------- -------------------------------------- Benzal chloride Heptachlor Vernolate ---------------------------------------------- ------------------------------------------- -------------------------------------- Benzo(a)anthracene Heptachlor epoxide Vinyl chloride ---------------------------------------------- ------------------------------------------- -------------------------------------- Benzo(a)pyrene Hexachlorobenzene Xylenes-mixed isomers ---------------------------------------------- ------------------------------------------- -------------------------------------- Benzo(b)fluoranthene Hexachlorobutadiene ---------------------------------------------- ------------------------------------------- -------------------------------------- Benzo(b)fluoranthene Hexachlorocyclopentadiene ---------------------------------------------- ------------------------------------------- -------------------------------------- Benzo(g,h,I)perylene Chemical warfare agents ---------------------------------------------- ------------------------------------------- -------------------------------------- Benzo(g,h,i)perylene Hexachloroethane ---------------------------------------------- ------------------------------------------- -------------------------------------- Malathion Idomethane ---------------------------------------------- ------------------------------------------- -------------------------------------- Benzo(k)fluoranthene Indeno(1,2,3-cd)pyrene ---------------------------------------------- ------------------------------------------- -------------------------------------- bis(2-Chloroethoxy)methane Isosafrole ---------------------------------------------- ------------------------------------------- -------------------------------------- 19 Destruction of Halogenated Materials in Liquids by the SET Technology ------------------------- ------------------------ --------------------- -------------------- Pre-Treatment Post-treatment Material Analyte (mg/L) (mg/L) ------------------------- ------------------------ --------------------- -------------------- Used Motor oil PCB 23,339 <1.0 ------------------------- ------------------------ --------------------- -------------------- Transformer oil PCB 509,000 20* ------------------------- ------------------------ --------------------- -------------------- Mineral Oil PCB 5,000 <0.5 ------------------------- ------------------------ --------------------- -------------------- Hexane PCB 100,000 0.5 ------------------------- ------------------------ --------------------- -------------------- Aqueous sludge Freon 113 276 ND ------------------------- ------------------------ --------------------- -------------------- Aqueous sludge TCE 262 ND ------------------------- ------------------------ --------------------- -------------------- Oil CCl 200,000 <0.5 ------------------------- ------------------------ --------------------- -------------------- Refrigerant R 23 999,999 ND ------------------------- ------------------------ --------------------- -------------------- Oil Dioxin 0.4 .000002 ------------------------- ------------------------ --------------------- -------------------- Oil Malathion 900,000 ND ------------------------- ------------------------ --------------------- -------------------- Freon Acetone 7,600 < LDR ------------------------- ------------------------ --------------------- -------------------- Freon Carbon Tet 14 < LDR ------------------------- ------------------------ --------------------- -------------------- Freon Ethylbenzene 287 < LDR ------------------------- ------------------------ --------------------- -------------------- Freon Methylene Chloride 1,600 < LDR ------------------------- ------------------------ --------------------- -------------------- Freon 1,1,1, TCA 69 < LDR ------------------------- ------------------------ --------------------- -------------------- Freon TCE 41 < LDR ------------------------- ------------------------ --------------------- -------------------- Freon Toluene 77 < LDR ------------------------- ------------------------ --------------------- -------------------- Freon Xylenes 690 < LDR ------------------------- ------------------------ --------------------- -------------------- Freon Freon-113 600,000 < LDR ------------------------- ------------------------ --------------------- -------------------- MARKETS AND CUSTOMERS General The Company markets its services and technologies to governmental and industrial customers throughout the United States. The Company also plans to target customers in markets abroad, particularly in Eastern Europe and the Middle East. A majority of the Company's sales are technical in nature and involve senior technical and management professionals, supported by the Company's marketing groups. During the year ended December 31, 2005, sales of approximately 100% of the Company's environmental management services were derived from contracts with federal, state and municipal government agencies. Contracts with governmental customers generally may be terminated at any time at the option of the customer. In 2005, Advanced Sciences' Oak Ridge Contracts, Aurora, CO contracts and ToxCo contracts accounted for approximately 98.5%, 0.5% and 1%, respectively of the Advanced Sciences' sales. In 2004, the Company had three customers which accounted for 38%, 28%, and 19%, respectively of the Advanced Sciences' sales. In 2003, the Company had three customers which accounted for 24%, 20%, and 15%, respectively of the Advanced Sciences' sales. The Company has benefited from its long-term relationships with many of its customers that result in repeat business. 20 Soil Decontamination The Company anticipates that the initial market for commercial applications of SET will be the hazardous and mixed waste and industrial by-products treatment and disposal market. Mixed waste is material that contains both a hazardous and radioactive component. The most common methods of treatment and disposal of hazardous wastes and industrial by-products include landfilling, chemical and biological treatment and incineration. Most of the current treatment and disposal methods entail air pollution and transportation risks. In a mixed waste, both hazardous and nuclear regulations apply, making disposal difficult, if not impossible. Currently, there exists very limited disposal options and these may not provide a permanent solution. Certain of these treatment and disposal methods result in large volumes of residual waste, which may require further treatment prior to disposal. As a result, a number of these methods are encountering increased public resistance and added regulatory oversight. As with any new technology or process, there has been initial resistance to the use of SET on a large scale, especially in connection with a strong vested interest on the part of the U.S. Military (based on substantial expenditures and commitments previously made) to use incineration for the destruction of weapons. In addition, other prospective projects for the Company have already been committed to other forms of destruction technology, including incineration, plasma arc, vitrification, molten metal, molten salt, chemical neutralization, biological treatment, catalytic electrochemical oxidation and supercritical wet oxidation. The Company, and its collaborative partners, have been attempting to overcome such competition by introducing SET in smaller clean-up projects and through feasibility studies demonstrating its applicability to larger projects, such as the Initial Harrisburg Contract during the years 2000 and 2001, and the WCS Fixed Facility Processing Contract during the year 2001. The SET process provides a significant advantage by allowing the processed material to be disposed of as a non-mixed waste by destroying the hazardous component. It may also be anticipated that, over an extended period, the market for decontamination of hazardous materials will continue to decline as past environmental degradation is corrected, and as the private and public sectors limit further pollution through prohibitions on production and use of a broad range of hazardous materials and through the modification and improved efficiency of various manufacturing processes. The mixed waste market is one of the few areas that shows growth and has limited competition when compared to the general hazardous waste market. The SET process brings a unique solution to the problem of remediating mixed waste. Environmental Management Based on market data compiled by Advanced Sciences, the largest market for environmental services today within the United States is the U.S. Government. Government wide spending levels for environmental services exceed $10 billion per year. The DOD and DOE are expected to account for approximately 66% of such expenditures and together expect to spend in excess of $200 billion for environmental work over the next twenty years. Advanced Sciences has a long-term record for providing environmental services to the U.S. Government with the DOD and DOE being its primary customers. 21 RAW MATERIALS The Company has historically experienced no difficulty in obtaining components used in the SET process for which it relies on a broad range of suppliers. Nevertheless, business disruptions or financial difficulties of such suppliers, shortages or other causes beyond the Company's control, could adversely affect the Company by increasing the cost of goods sold or reducing the availability of such components. If the Company was unable to obtain a sufficient supply of required components, it could experience significant delays in the furnishing of components used in the SET process, which could result in the loss of orders and customers and could have a material adverse affect on the Company's business, financial condition and results of operations. In addition, if the cost of finished components was to increase, there can be no assurance that the Company would be able to pass such increase on to its customers. The use of outside suppliers also entails risks of quality control and disclosure of proprietary information. BACKLOG At December 31, 2005, total potential backlog for the Company was approximately $9,761,000 as compared with approximately $5,400,000 as of December 31, 2004. The total backlog represents work for which the Company has entered into a signed agreement or purchase order with respect thereto or has received an order to proceed with work up to a specified dollar amount. The Company estimates that all of the total backlog represents work that will be completed in the next 12 months. Backlog amounts have historically resulted in revenues; however, no assurance can be given that all amounts included in backlog will ultimately be realized, even if covered by written contracts or work orders. RESEARCH AND DEVELOPMENT Research and development activities are ongoing and utilize internal technical staff, as well as independent consultants retained by the Company and its subsidiaries. All such activities are company-sponsored. Research and development expenditures for the Company and its subsidiaries were $5,000, $9,000, and $70,000 for the years ended December 31, 2005, 2004, and 2003, respectively. INTELLECTUAL PROPERTY The Company currently has sixteen (16) issued U.S. and foreign patents. The average life expectancy for the currently issued patents is 11.67 years. As patents are issued, the U.S. Patent and Trademark Office assigns the Company a twenty (20) year patent-life for each patent issued. The Company believes that its patent portfolio provides the Company the necessary "proprietary turf" in which it can market, distribute, and license the full range of the SET technology and all of its derivatives. Additionally, the Company's strength of its patent portfolio may operate as an effective "barrier to entry" in several of the markets in which the Company is presently conducting business. To protect its trade secrets and the un-patented proprietary information in its development activities, the Company requires its employees, consultants and contractors to enter into agreements providing for the confidentiality and the Company's ownership of such trade secrets and other 22 un-patented proprietary information originated by such persons while in the employ of the Company. The Company also requires potential collaborative partners to enter into confidentiality and non-disclosure agreements. There can be no assurance that any patents that may hereafter be obtained, or any of the Company's confidentiality and non-disclosure agreements, will provide meaningful protection of the Company's confidential or proprietary information in the case of unauthorized use or disclosure. In addition, there can be no assurance that the Company will not incur significant costs and expenses, including the costs of any future litigation, to defend its rights in respect of any such intellectual property. COMPETITION Soil Decontamination The Company anticipates that the market for commercial private sector applications of SET will be hazardous and non-hazardous waste and industrial by-products treatment and disposal, in particular the more recalcitrant "mixed" wastes (wastes containing a radioactive element). Several large domestic and international companies and numerous small companies, many of whom have substantially greater financial and other resources than the Company, compete with the Company in this market. The Company primarily competes in the hazardous waste treatment market in the U.S., a market valued at over $3.7 billion for 2005. The top ten competitors in this market account for over 70 percent of the revenues for this market sector. The dominant companies in this sector include companies with permitted waste treatment and disposal sites, including Energy Solutions, Pacific EcoSolution, and American Ecology, as well as other treatment companies such as Duratek and PermaFix. The Company's revenues for 2005 account for less than 1 percent of the dollar volume of the hazardous waste market. Any one or more of the Company's competitors or other enterprises not presently known may develop technologies which are superior to the technologies utilized by the Company. To the extent that the Company's competitors are able to offer comparable services at lower prices or of higher quality, or more cost-effective remediation alternatives, the Company's ability to compete effectively could be adversely affected. The domestic and international governmental public sector of the market is dominated by many large multinational corporations who are presently engaged in providing incineration and other conventional technologies in decontaminating chemical weapons and warfare agents, concentration of nuclear wastes and the decontamination of military vessels and other hardware. These competitors include Raytheon Corporation (the current general contractor for the Johnston Atoll incinerator), EG&G, Inc. (the general contractor for the Tooele Army Depot), Mason and Hanger (the general contractor for the Newport News Naval Facility), Waste Management Corporation (a bidder for domestic "large burial" stockpile weapons decontamination), and others, including Browning-Ferris Industries, Inc., Jacobs Engineering, Inc., Fluor Daniel Corporation and Lockheed Martin Marietta Corporation. All of these corporations have substantially greater financial, personnel and other resources than the Company. In addition, many prospective users of SET have already committed substantial resources to other forms of environmental remediation technology, including incineration, plasma arc, vitrification, bio-remediation, molten salt, chemical neutralization, catalytic electrochemical oxidation and supercritical wet oxidation. 23 The Company believes that its ability to compete in both the commercial private and governmental public sectors is dependent upon SET being accepted in these sectors as a superior, more cost-effective method to achieve decontamination of a variety of materials. Environmental Management Advanced Sciences has been primarily engaged in providing environmental consulting and scientific support services to United States government agencies, such as the DOE and DOD. Based on market data compiled by Advanced Sciences, the largest market for environmental services today is the United States government, which is expected to continue its spending level for environmental services at approximately $9 to $10 billion for 2006. The DOE and DOD are expected to account for approximately 66% of such expenditures. Commodore Advanced Sciences currently occupies a position in the waste management and environmental services arena by virtue of its long-term record for providing environmental services to the United States government. External developments and forces affecting Advanced Sciences include competition from its competitors, as well as, demographic and technological trends that influence the composition and needs of its customer base and the usefulness and competitive position of its services. In addition, in order to maintain its position in its market, Advanced Sciences must be able to respond to economic trends and regulatory actions that affect the usefulness and accessibility of its services and control its costs of doing business. In the hazardous waste management market, Advanced Sciences' competitors include such firms as Roy F. Weston, Jacobs Engineering, Science Applications International Corp., CH2M Hill and CDM, all of whom have greater financial and other resources than the Company. In providing environmental impact assessment services, Commodore Advanced Sciences' principal competitors in this market sector include Tetra Tech, The Earth Technology Corp., Battelle, URS and Woodward-Clyde. Primary factors affecting Advanced Sciences' competitiveness in this market are its ability to continue to attract and retain qualified technical and professional staff with quality project performance records and to control its costs of doing business. In an effort to maintain its competitive position, Advanced Sciences believes that it has developed a solid infrastructure, acquired a qualified professional staff, and developed aggressive marketing objectives to provide hazardous waste management and environmental sciences to the United States government and private sector industrial customers. The Company believes its competitive position with the United States government is enhanced by the physical proximity of Advanced Sciences' plants to DOE and DOD sites, its skilled professional staff, prior project experience with the United States government, numerous existing multi-year contracts with the United States government, integrated services and high quality performance. 24 ENVIRONMENTAL REGULATION The environmental legislation and policies which the Company believes are applicable to SET in the United States primarily include TSCA, RCRA, and the Comprehensive Environmental Response, Compensation and Liability Act of 1980 ("CERCLA"), as amended by the Superfund Amendments and Reauthorization Act of 1986 ("SARA"), and may include, on a case by case basis, the Clean Air Act of 1970, as amended (the "Clean Air Act"). These laws regulate the management and disposal of toxic and hazardous substances, provide for the protection of land and groundwater resources, and control the discharge of pollutants into the air. Many of these laws have international counterparts, particularly in Europe and elsewhere in North America. TSCA regulates the manufacture, distribution, and sale of chemical substances, and requires testing of new chemicals and new uses of known chemicals that may present an unreasonable risk of injury to health or the environment. The EPA, through TSCA, has adopted comprehensive regulations for PCB's and other halogenated substances, as part of a vast regulatory program covering thousands of chemicals. RCRA was enacted in 1976 with the primary objective to protect human health and the environment and to conserve valuable material and energy resources. The most important aspect of RCRA is its establishment of "cradle-to-grave" management and tracking of hazardous waste, from generator to transporter, to treatment, storage, and disposal. CERCLA and subsequent amendments under SARA (often referred to collectively as Superfund) impose strict, retroactive liability upon persons who generated, transported, or arranged for the transportation of hazardous substances or owned or operated the vessels or facilities at which such substances were disposed. CERCLA provides for the investigation and remediation of hazardous substance sites and mandates that any hazardous substances remaining on-site must meet certain regulatory requirements, with a preference for innovative technology. These program regulations may create an incentive to utilize environmental-friendly technologies such as SET, which destroy targeted wastes without creating additional residual waste product. Moreover, to the extent hazardous substances are effectively destroyed, potential liability can be eliminated or significantly reduced. The Clean Air Act empowered the EPA to establish and enforce ambient air quality standards and limitations on emissions of air pollutants from specific facilities. In 1987, the EPA began to enforce stricter standards for incineration emissions. With more stringent regulations on waste reduction technologies, the Company believes that SET could obtain a desired market share since, in most cases, it produces little or no air emissions. CERCLA imposes strict joint and several liability upon owners or operators of facilities when a release or threatened release of a hazardous substance has occurred, upon parties who generated hazardous substances that were released at such facilities and upon parties who arranged for the transportation of hazardous substances to and from such facilities. The Company's plans to own and operate SET at on-site installations expose the Company to potential liability under CERCLA for releases of hazardous substances at those sites. In the event that off-site treatment, storage or disposal facilities utilized by the Company for final disposition of residues from SET are targeted for investigation and clean-up under CERCLA, the Company could incur liability as a generator of such materials or by virtue of having arranged for their transportation and disposal. 25 In light of such potential liability, the Company has designed the SET technology to minimize the potential for release of hazardous substances into the environment. In addition, the Company has developed plans to manage the risk of CERCLA liability, including training of operators, use of operational controls and structuring of its relationships with the entities responsible for the handling of waste materials and by-products. The Company also maintains insurance with respect to environmental claims, although there can be no assurance that such insurance will be adequate. The Clean Air Act Amendments of 1990 impose strict requirements upon owners and operators of facilities that discharge pollutants into the environment. These amendments may require that certain air emission control technology be installed on the SET systems in the event that there is any discharge of non-recovered gases into the environment. Such additional air emission controls can be costly and require an air permit to construct and operate. The Company possesses a Nationwide Permit issued by the EPA under the Alternative Destruction Technology Program that allowed it to use SET on-site to treat PCB-contaminated soils and metallic surfaces, although the permit is currently expired. The Nationwide Permit contains numerous conditions for maintaining the Nationwide Permit and there can be no assurance that the Company will be able to comply with such conditions to maintain and/or secure renewal of the Nationwide Permit. In addition, if environmental legislation or regulations are amended, or are interpreted or enforced differently, the Company may be required to meet stricter standards of operation and/or obtain additional operating permits or approvals. Failure to obtain such permits or otherwise comply with such regulatory requirements could have a material adverse effect on the Company and its operations. Various revisions to the equipment and process parameters are being made to the existing permit. The Company believes that the revised permit will be issued pending the final site selection for the full or part-time operation of any SET system for the treatment of PCB wastes. The revised permit will require the Company to fund closure costs associated with the implementation of any SET system for the treatment of PCB wastes. The closure costs are calculated on a site-by-site basis and are funded accordingly by the Company. EMPLOYEES As of December 31, 2005, the Company (including all of its direct and indirect subsidiaries) had a total of 36 full-time and 2 part-time employees, of which approximately 30 are engineers, scientists, environmental technicians and other professionals. None of such employees are covered by collective bargaining agreements and the Company's relations with its employees are believed to be good. OTHER INFORMATION See Item 8, Financial Statements and Supplementary Data, of this Annual Report on Form 10-K for information regarding revenue from customers, a measure of profit or loss and total assets for each of the Company's segments for the last 3 fiscal years. 26 ITEM 1A. RISK FACTORS ---------------------- Investing in our securities involves a material degree of risk. Before making an investment decision, you should carefully consider the risk factors set forth below as well as other information we include or incorporate by reference in this annual report and the additional information in the other reports we file with the U.S. Securities and Exchange Commission ("SEC"). Credit and Business Risks The documents governing our indebtedness restrict our ability and the ability of our subsidiaries to engage in some business transactions. We have entered into a loan arrangement with the Shaar Fund, Ltd that is secured by essentially all the assets in the Company that are not related to the receivable line of credit facility with Commerce Funding Corporation (the "New Shaar Note"). The New Shaar Note is used to fund working capital and general corporate requirements. As of December 31, 2005, the outstanding balance was $5,426,233. The agreements governing the Shaar Loan restricts our ability and the ability of our subsidiaries to, among other things, engage in the following actions: o declare or pay dividends on and redeem or repurchase capital stock; o transfer assets or make loans between us and some of our subsidiaries; o make material changes in the nature or conduct of our business; o merge or consolidate with, acquire substantially all of the stock or assets of any other companies; and o transfer or sell assets. Our failure to comply with obligations under the New Shaar Note could result in an event of default. A default, if not cured or waived, could permit acceleration of our indebtedness. We cannot be certain that we will be able to remedy any default. If our indebtedness is accelerated, we cannot be certain that we will have funds available to pay the accelerated indebtedness or that we will have the ability to refinance the accelerated indebtedness on terms favorable to us or at all. Our Receivables Line of Credit may restrict our ability and the ability of our subsidiaries to engage in some business transactions. We have entered into a secured credit facility (the "Credit Facility") which consists of a one-year, $2 million receivables financing line of credit to fund working capital and general corporate requirements. As of December 31, 2005, the outstanding balance was $141,000. Our failure to comply with obligations under the Credit Facility could result in an event of default under the facility. A default, if not cured or waived, could permit acceleration of our indebtedness. We cannot be certain that we would be able to remedy any default. If our indebtedness is accelerated, we cannot be certain that we will have funds available to pay the accelerated indebtedness or that we will have the ability to refinance the accelerated indebtedness on terms favorable to us or at all. We Have Liquidity Problems and are Uncertain of Our Continued Access to Loans Our current monthly operating expenses exceed cash revenues by approximately $80,000. Currently, this cash shortfall is being covered by loans from The Shaar Fund, Ltd., but The Shaar Fund, Ltd. may discontinue these loans 27 at any time and for any reason. If that happened, we would not be able to meet our current obligations and would be unable to continue operations unless alternative funding was obtained. In addition, we owe $888,000 in loans that are currently due or are payable on demand. Although the lenders on these loans have not yet called the loans, the Company does not currently have the ability to pay these loans absent additional financing. If we are able to obtain financing to cover these obligations, it probably would involve additional dilution to shareholders or additional financial risk to the Company. Our Ability to Operate as a Going Concern is in Doubt The report of our independent registered public accounting firm on our fiscal 2003, 2004 and 2005 consolidated financial statements contains a "going concern" qualification in which they express substantial doubt about our ability to continue in business. As shown in the consolidated financial statements for the years ended December 31, 2005, 2004, and 2003, the Company incurred losses of $2,714,000, $2,404,000, and $2,957,000, respectively. The Company has also experienced net cash inflows (outflows) from operating activities of ($1,337,000), ($1,532,000), and ($955,000) for the years ended December 31, 2005, 2004 and 2003 respectively. At December 31, 2005 and 2004 the Company had working capital (deficit) of ($4,586,000) and ($6,389,000) respectively. Overall, the Company has experienced significantly greater revenues and has improved its income/(loss) from operations from (988,000) to (2,000,000) for the year ended December 31, 2005 compared to the year ended December 31, 2004. Our losses have resulted from a combination of: o costs associated with expansion of our environmental management services business. o large expenditures for infrastructure to support our anticipated future growth; o significant costs associated with our commercialization activities; o financing and interest expenses; o inadequate revenues due to significant delays in our obtaining material project contracts from potential governmental and private-sector customers; and o general and administrative expenses. Until we are able to obtain additional significant environmental services contracts, or one or more large projects for our SET technology, we will continue to experience losses. 28 Our Business Strategy Depends on Business Collaborations In the environmental services and hazardous waste treatment markets, the Company may not be able to enter into favorable business collaborations and might thus be required to bid upon projects for its own account. If such bids were successful, the Company would be required to make significant expenditures on personnel and capital equipment which would require significant financing. Even if the Company is successful in achieving favorable business collaborations, the implementation of such arrangements and the expansion of the Company's business may require the commitment of significant capital resources toward the hiring of technical and operational support personnel, the development of a waste treatment facility for SET, and the building of equipment for on-site remediation of contaminated elements. In the event the Company is presented with one or more significant environmental services contracts, reclamation or clean-up projects, individually or in conjunction with collaborative working partners, it may require additional capital to take advantage of such opportunities. There can be no assurance that such financing will be available or, if available, that it will be on favorable terms. Our previously reported losses could increase due to our inability to accurately estimate the overall risks, revenue, or costs on a contract. We generally enter into three principal types of contracts with our clients: firm fixed-price, fixed-unit-rate, and time-and-materials award. Under our firm fixed-price and fixed-unit-rate contracts, we receive a fixed price regardless of the actual costs we incur and, consequently, we are exposed to a number of risks. These risks include underestimation of costs, problems with new technologies, unforeseen costs or difficulties, delays beyond our control and economic and other changes that may occur during the contract period. Under our time-and-materials contracts, we are paid for labor and costs incurred at negotiated contractual rates. Profitability on these contracts is driven by the extent of utilization of our billable personnel and cost control. Accounting for a contract requires judgment relative to assessing the contract's estimated risks, revenue, and costs, and on making judgments on other technical issues. Due to the size and nature of several of our contracts, the estimation of overall risks, revenue and costs at completion is complicated and subject to many variables. Changes in underlying assumptions, circumstances, or estimates may also adversely affect future period financial performance. We may continue to encounter difficulties in pursuing our growth objectives. Although the Department of Energy has indicated that a number of new contracts will be awarded in 2006 and 2007, governmental awards are frequently delayed. Additionally, we cannot predict whether we will be successful in obtaining new federal services business awards. In some instances, we may choose to bid as the lead of a prime contractor team. In the past, we have operated mainly as a subcontractor or in a minority position on the prime contractor team. We expect to be bidding against organizations that have substantially greater resources and experience in being the leading prime contractor or sub-contractor for these kinds of projects. In light of these uncertainties for new business awards in our commercial and federal services business units, our growth plan anticipates pursuing new opportunities for providing services with respect to sampling and data management, low-level radioactive waste treatment at DOE sites in the United States. In many of these potential opportunities, we may not have experience comparable to our current and past experience in our federal and 29 commercial businesses. Thus, we may be subject to a range of risks in obtaining and performing these types of businesses, the adequacy and experience of management, and the adequacy of operational resources and technical capabilities needed to perform these mandates successfully. We cannot predict whether we will be successful in obtaining or performing any new business initiatives in these new business areas. Government Contracting Risks The U.S. government can audit and disallow claims for compensation under our government contracts, and can terminate those contracts without cause. Our government contracts, which are primarily with the DOE and DoD, are, and are expected to continue to be, a significant part of our business. We derived approximately 100% of our consolidated revenues in 2005 and 96% of our consolidated revenues in 2004 from contracts funded by the DOE. The work that we performed for customers that represented greater than 10% of the Company's segment revenues were with a prime contractor, Bechtel Jacobs Engineering. Allowable costs under government contracts are subject to audit by the U.S. government. To the extent that these audits result in determinations that costs claimed as reimbursable are not allowable costs or were not allocated in accordance with Federal government regulations, we could be required to reimburse the U.S. government for amounts previously received. In addition, if we were to lose and not replace our revenues generated by one or more of the U.S. government contracts, our businesses, financial condition, results of operations, and cash flows could be adversely affected. We have a number of contracts and subcontracts with agencies of the U.S. government, principally for environmental services and data management, that extend beyond one year and for which additional government funding has not yet been appropriated. We cannot be certain that the U.S. government will appropriate such funds. All contracts with agencies of the U.S. government are subject to unilateral termination at the option of the customer. In the event of a termination, we would not receive projected revenues or profits associated with the terminated portion of those contracts; however, all costs incurred prior to termination are recoverable in accordance with Federal Acquisition Regulations. In addition, government contracts are subject to specific procurement regulations, contract provisions, and a variety of other socioeconomic requirements relating to the formation, administration, performance, and accounting of these contracts. Many of these contracts include express or implied certifications of compliance with applicable laws and contract provisions. As a result of our government contracting, claims for civil or criminal fraud may be brought by the government for violations of these regulations, requirements, or statutes. We may also be subject to qui tam litigation brought by private individuals on behalf of the government under the Federal Civil False Claims Act, which could include claims for up to treble damages. Further, if we fail to comply with any of these regulations, requirements, or statutes, our existing government contracts could be terminated, we could be suspended from government contracting or subcontracting, including federally funded projects at the state level, and our ability to participate in foreign projects funded by the United States could be adversely affected. If one or more of our government contracts are terminated for any reason, or if we are suspended from government work, we could suffer a significant reduction in expected revenues. Most of our government contracts are awarded through a regulated competitive bidding process. The inability to complete existing government contracts or win new government contracts over an extended period could harm our operations and adversely affect our future revenues. Most of our government contracts are awarded through a regulated competitive bidding process. Some government contracts are awarded to multiple competitors, which increases overall competition and pricing pressure and may 30 require us to make sustained post-award efforts to realize revenues under these government contracts. In addition, government clients can generally terminate or modify their contracts at their convenience. Moreover, even if we are qualified to work on a new government contract, we might not be awarded the contract because of existing government policies designed to protect small businesses and underrepresented minority contractors. The inability to complete existing government contracts or win new government contracts over an extended period could harm our operations and adversely affect our future revenues. If our partners fail to perform their contractual obligations on a project, we could be exposed to legal liability, loss of reputation and profit reduction or loss on the project. We perform projects jointly with outside partners, entering into subcontracts, joint ventures, and other contractual arrangements so that we can jointly bid and perform on particular projects. Success on these joint projects depends in large part on whether our partners fulfill their contractual obligations satisfactorily. If any of our partners fail to satisfactorily perform their contractual obligations as a result of financial or other difficulties, we may be required to make additional investments and provide additional services in order to make up for our partner's shortfall. If we are unable to adequately address our partner's performance issues, then our client could terminate the joint project, exposing us to legal liability, loss of reputation, and reduced profit or loss on the project. Our future success will likely depend, in part, on the success of our existing collaborative relationships. Collaborative arrangements involve risks that the participating parties may disagree on business decisions and strategies resulting in potential delays, additional costs, and risks of litigation. Our inability to successfully maintain existing collaborative relationships or enter into new collaborative arrangements could have a material adverse effect on our results of operations. Regulatory Risks Our services expose us to significant risks of liability and our insurance policies may not provide adequate coverage. When we perform our hazardous waste treatment services, our personnel and equipment may be exposed to radioactive and hazardous materials and conditions. Although we are committed to a policy of operating safely and prudently, we may be subject to liability claims by employees, customers, and third parties as a result of such exposures. In addition, we may be subject to fines, penalties, or other liabilities arising under environmental or safety laws. To date, we have been able to obtain liability insurance for the operation of our business. However, there can be no assurance that our existing liability insurance is adequate or that it will be able to be maintained or that all possible claims that may be asserted against us will be covered by insurance. A partially or completely uninsured claim, if successful and of sufficient magnitude, could have a material adverse effect on our results of operations and financial condition. We operate in a highly regulated industry requiring our customers and us to have and comply with federal, state, and local government permits and approvals. We and our customers operate in a highly regulated environment. Facilities utilizing our hazardous waste treatment technology are required to have federal, state, and local government permits and approvals. Any of these permits or approvals may be subject to denial, revocation, or modification under various circumstances. Failure to obtain or comply with the conditions of permits or approvals or with environmental and safety laws may adversely affect our operations and may subject us to penalties and other sanctions. 31 In addition to regulatory requirements, environmental laws impose joint and several liabilities for the cleanup of contamination upon the current and former owners and operators of contaminated property and on any party who arranges for the disposal or treatment of hazardous substances at a facility that is or becomes contaminated. Such liability is imposed without regard to fault and regardless of knowledge or compliance with environmental requirements. There can be no assurance that we will not face such liability in the future. In addition, if new environmental legislation or regulations are enacted or existing legislation or regulations are amended or are interpreted or enforced differently, we or our customers may be required to obtain additional operating permits or approvals. Changes in environmental requirements also may require us to change or improve our waste management technologies and services and incur additional expenses. There can be no assurance that we will be able to meet all of the applicable regulatory requirements. Changes in existing environmental laws, regulations, and programs could reduce demand for our environmental services, which could cause our revenues to decline. A significant amount of our engineering services and hazardous waste treatment business is generated either directly or indirectly as a result of existing Federal and state laws, regulations, and programs related to pollution and environmental protection. Federal, state, and local environmental legislation and regulations require substantial expenditures and impose liabilities for noncompliance. Accordingly, a relaxation or repeal of these laws and regulations, or changes in governmental policies regarding the funding, implementation, or enforcement of these programs, could result in a decline in demand for environmental services that may have a material adverse effect on our revenue. Competition Risks We face increasing competition in the provision of environmental services and waste treatment technologies. The environmental services and hazardous waste treatment industry is characterized by several large companies and numerous small companies. Any of these companies may possess or develop technologies superior to our technologies. In addition, we compete with companies offering environmental services and hazardous waste treatment technologies alternatives. In our services business, our competitors range from major national and regional environmental service and consulting firms with large environmental services staffs to small local firms. To the extent that our competitors offer more cost-effective management technology alternatives or offer comparable services at lower prices, our ability to compete effectively could be adversely affected. Our success depends on attracting and retaining qualified personnel in a competitive environment. We are dependent upon our ability to attract and retain highly qualified managerial and business development personnel, skilled technical specialists, and experts in a wide range of scientific, engineering, and health and safety fields. Competition for key personnel is intense. We cannot be certain that we will retain our key managerial, business development, and technical personnel or that we will attract or assimilate key personnel in the future. Failure to retain or attract such personnel could materially adversely affect our businesses, financial position, results of operations, and cash flows. We are also highly dependent upon the technical expertise and management experience of our senior management. The loss of the services of any of these individuals could have a material adverse effect on our results of 32 operations and financial condition. Senior management is not subject to employment agreements. There are no "key man" life insurance policies on any members of senior management or any other personnel. Other Risks Certain Anti-Takeover Provisions and Potential Adverse Effect on Market Price of Securities from Issuance of Preferred Stock The Company's certificate of incorporation, as amended (the "Certificate of Incorporation"), and by-laws (the "By-laws") contain certain provisions that could have the effect of delaying or preventing a change of control of the Company, which could limit the ability of security holders to dispose of their shares in such transactions. The Certificate of Incorporation authorizes the Board of Directors to issue one or more series of preferred stock without stockholder approval. Such preferred stock could have voting and conversion rights that adversely affect the voting power of the holders of Convertible Preferred Stock or Common Stock, or could result in one or more classes of outstanding securities that would have dividend, liquidation or other rights superior to those of the Convertible Preferred Stock or Common Stock. Issuance of such preferred stock may have an adverse effect on the then prevailing market price of the Convertible Preferred Stock or Common Stock. Additionally, the Company is subject to the anti-takeover provisions of Section 203 of the Delaware general corporate law (DGCL), which prohibits the Company from engaging in a "business combination" with an "interested stockholder" for a period of three years after the date of the transaction in which the person became an interested stockholder, unless the business combination is approved in a prescribed manner. Section 203 of the DGCL could have the effect of delaying or preventing a change of control of the Company. Our Charter Contains Authorized, Unissued Preferred Stock That May Inhibit A Change Of Control Of Our Company Under Circumstances That Could Give You An Opportunity To Realize A Premium Over Prevailing Market Prices Of Our Securities. Our certificate of incorporation and by-laws contain provisions that could make it more difficult for a third party to acquire the company under circumstances that could give stockholders an opportunity to realize a premium over then-prevailing market prices of our securities. Our certificate of incorporation authorizes our board of directors to issue preferred stock without stockholder approval and upon terms as it may determine. The rights of holders of our common stock are subject to, and may be adversely affected by, the rights of future holders of preferred stock. In addition, our by-laws require stockholders to provide advance notice to nominate candidates for election as directors and to submit proposals for consideration at stockholder meetings. Section 203 of the Delaware General Corporation Law makes it more difficult for an "interested stockholder" (generally a 15% stockholder) to effect various business combinations with a corporation for a three-year period after the stockholder becomes an "interested stockholder." In general, these provisions may discourage a third party from attempting to acquire our company and, therefore, may inhibit a change of control of our company The value of our Common Stock could continue to be volatile. Our Common Stock has experienced substantial price volatility. In addition, the stock market has experienced extreme price and volume fluctuations that have affected the market price of many companies and that have often been unrelated to the operating performance of these companies. The overall market and the price of our Common Stock may continue to fluctuate greatly. The trading price of our Common Stock may be significantly affected by various factors, including: 33 o quarter-to-quarter variations in our financial results, including revenue, profits, and other measures of financial performance or financial condition; o ability to continue to finance any shortfalls in cash flows which currently average $80,000 per month: o conversion of our convertible debt and preferred stock instruments into the Company's common stock will be dilutive; o announcements of new contracts or technological development; o announcements by us or our competitors of significant acquisitions; o resolution of threatened or pending litigation; o status of our collaborative arrangements or those of competitors; o changes in investors' and analysts' perceptions of our business or any of our competitors' businesses; o investors' and analysts' assessments of reports prepared or conclusions reached by third parties; o changes in environmental legislation; o patent or proprietary rights developments; o broader market fluctuations; and o general economic or political conditions. Additionally, volatility or a lack of positive performance in our stock price may adversely affect our ability to retain key employees, many of whom are granted stock options, the value of which are dependent on the performance of our stock price. Our quarterly operating results may fluctuate significantly, which could have a negative effect on the price of our Common Stock. Our quarterly revenue, expenses, and operating results may fluctuate significantly because of a number of factors, including: o unanticipated changes in contract performance that may affect profitability, particularly with contracts that have funding limits; o the timing of resolutions on requests for equitable adjustments ("REAs"), and other contract adjustments; o the seasonality of the spending cycle of our public sector clients, notably the Federal government, and the spending patterns of our commercial sector clients; o employee staff levels and utilization rates; o the ability of our clients to terminate engagements without penalties; o delays incurred in connection with an engagement; o the size and scope of engagements; o changes in the prices of services offered by our competitors; o changes in accounting rules; and o general economic or political conditions. 34 Variations in any of these factors could cause significant fluctuations in our operating results from quarter to quarter and could result in net losses. Absence of Dividends on Common Stock The Company has never declared or paid any dividends on its Common Stock. The declaration and payment in the future of any cash or stock dividends on the Common Stock will be at the discretion of the Board of Directors of the Company and will depend upon a variety of factors, including the ability of the Company to service its outstanding indebtedness, the Company's future earnings, if any, capital requirements, financial condition and such other factors as the Company's Board of Directors may consider to be relevant from time to time. Pursuant to the terms governing the Convertible Preferred Stock, the Company's Board of Directors may not declare dividends payable to the holders of Common Stock unless and until all accrued cash dividends through the most recent past annual payment date have been paid in full to the holders of the Convertible Preferred Stock. Earnings of the Company, if any, not paid as dividends to holders of the Convertible Preferred Stock are expected to be retained for use in expanding the Company's business. Accordingly, the Company does not expect to declare or pay any dividends on its Common Stock in the foreseeable future. Potential Adverse Effect on Market Price of Securities from Future Sales of Common Stock Assuming the conversion of all securities convertible into Common Stock and the exercise of all warrants and options to purchase Common Stock using the closing stock quote as April 5, 2006, the Company will have approximately 51,214,691 shares of Common Stock outstanding as of December 31, 2005. Of such shares, 27,814,469 shares of Common Stock will be freely tradable without restriction or further registration under the Securities Act, subject, if purchased by "affiliates" of the Company, to the volume and certain other limitations of Rule 144 promulgated under the Securities Act. The remaining 23,400,222 shares of Common Stock are "restricted securities" as defined in Rule 144 promulgated under the Securities Act, and may only be sold in the public market if such shares are registered under the Securities Act or sold in accordance with Rule 144 or another exemption from registration under the Securities Act. No prediction can be made as to the effect, if any, that future sales of shares, or the availability of shares for future sale, will have on the market price of the Common Stock prevailing from time to time. Sales of substantial amounts of Common Stock (including shares of Common Stock issued upon the conversion of the Convertible Preferred Stock and the exercise of outstanding warrants and stock options), or the perception that such sales could occur, could adversely affect prevailing market prices for the Common Stock. If such sales reduce the market price of the Common Stock, the Company's ability to raise additional capital in the equity markets could be adversely affected. Future Sales Of Our Common Stock May Have A Depressive Effect On The Market Price Of Our Stock Sales of substantial amounts of our common stock, or the perception that those sales could occur, could adversely affect prevailing market prices for our common stock. On a fully-diluted basis (not including the shares of our common stock underlying any of our outstanding convertible preferred stock or the conversion feature of the New Shaar Note), approximately 13,977,679 shares of our common stock would be outstanding as of December 31, 2005. Of such 35 shares, 12,282,389 shares would be freely tradable without restriction or further registration under the Securities Act, except to the extent those shares are held by our "affiliates." The remaining 1,695,290 shares are "restricted securities" as defined in Rule 144 promulgated under the Securities Act, and may only be sold in the public market if those shares are registered under the Securities Act of 1933, as amended, or sold in accordance with Rule 144 or another exemption from registration. Our Stock Price Could Decline Due to Sales of Shares Issued upon Conversion of the Series J Convertible Preferred Stock or the New Shaar Note or by Short Sales. To the extent the Series J convertible preferred stock and/or the balance of the New Shaar Note are converted into shares of our common stock, or dividends in respect of those securities are paid in shares of our common stock rather than cash, a significant number of additional shares of common stock may be sold into the market, which could decrease the price of our common stock due to additional supply of shares relative to demand in the market. In that case, we could be required to issue an increasingly greater number of shares of our common stock upon future conversions of Series J convertible preferred stock and /or the exercise of the conversion feature on the New Shaar Note, sales of which could further depress the price of our common stock and have a material adverse effect on the value of your investment. Moreover, since the conversion prices of the Series J convertible preferred stock and the conversion feature on the New Shaar Note will be based on the average of the closing prices of our common stock over a period of ten trading days prior to conversion, but in no case greater than $0.50 per share or less than $0.05 per share, the conversion prices could be less than the actual market price of our common stock on the date of conversion. If the sale of a large amount of shares of our common stock upon conversion of the Series J convertible preferred stock and the exercise of the conversion feature on the New Shaar Note results in a decline in the price of our common stock, this event could encourage short sales of our common stock by stockholders, or margin calls upon investors in our common stock. Short sales or margin calls could place further downward pressure on the price of our common stock. No corporation actions requiring stockholder approval can take place without the approval of our controlling stockholders. The executive officers, directors, and entities affiliated with them, in the aggregate, beneficially own approximately 42 percent of our voting stock. These stockholders acting together or with others would be able to decide or significantly influence all matters requiring approval by our stockholders, including the election of directors and the approval of mergers or other business combination transactions. This concentration of ownership may have the effect of delaying or preventing a merger or other business combination transaction, even if the transaction would be beneficial to our other stockholders. ITEM 1B. UNRESOLVED SEC STAFF COMMENTS None. 36 ITEM 2. PROPERTIES. ------- ----------- The Company's principal executive offices are located in New York, New York. The Company leases approximately 2,000 square feet of office space in New York from an affiliate of Bentley J. Blum, a director and principal stockholder of Commodore Environmental Services, Inc. ("Environmental") and a director of the Company, Solution, Commodore Separation Technologies, Inc. ("Separation"), Advanced Sciences and certain other subsidiaries and affiliates of the Company. Such space also serves as the principal executive offices of Environmental and certain of its affiliates. Although the Company's lease for the New York City space expired in December 1998, the Company has been permitted to use the New York City office space during 1999, 2000, 2001, 2002, 2003, 2004, 2005 and 2006 in exchange for providing general and director & officer insurance coverage to Environmental and Separation under its policy. In November 2003 the Company issued 1,367,790 warrants to Mr. Blum for consideration for the loans made to the Company, the usage of office space and personnel of the Blum Asset Trust over the last five years, and debt forbearance on the Blum Demand Note. In addition to the New York, New York facilities, since April 2000, the Company has leased approximately 1,600 square feet of space in Alexandria, Virginia from Dr. Shelby T. Brewer, a director and executive officer of the Company, on a month-to-month basis, for a rental payment in the amount of $1,700 per month. The Company leases approximately 400 square feet of laboratory, office and storage space at Kirtland Air Force Base in Albuquerque, New Mexico for rental payments in the amount of $735 per month, pursuant to a month-to-month lease arrangement. The Company leases approximately 1000 square feet of exterior covered storage space for the Company's industrial and waste processing equipment in Hobbs, New Mexico for rental payments in the amount of $263 per month, pursuant to a month-to-month lease arrangement. The Company leases approximately 1500 square feet of storage for various pieces of the Company's industrial and waste processing equipment from Mr. Jon Rogers, an employee of the Company, in Mount Gilead, Ohio for rental payments in the amount of $500 per month, pursuant to a month-to-month lease arrangement. The Company leases approximately 500 square feet of storage for raw materials to be used in the Company's waste processing equipment in Mobile, Alabama for rental payments in the amount of $172 per month, pursuant to a month-to-month lease arrangement. Advanced Sciences' principal executive and administrative offices are located in Richland, Washington. Advanced Science leases approximately 3,750 square feet of space for rental payments in the amount of $3,500 per month under a yearly lease. In addition to the Richland, Washington facilities, Advanced Sciences has leased approximately 1,600 square feet of space in Oak Ridge, TN for its administrative functions, on a three year lease, for a rental payment in the amount of $1,900 per month. Additionally, Advanced Sciences leases approximately 37 5,500 square feet of space at K-1035, at a DOE facility in Oak Ridge for its operational staff for the EDAM contract, on a three year lease, for a rental payment in the amount of $3,385 per month. Advanced Sciences also leases approximately 1,000 square feet of space for field operations in Wheat Ridge, Colorado for a rental payment in the amount of $840 per month. The Company believes that the foregoing properties will satisfy the business and operational needs of the Company and its subsidiaries in the present and in the foreseeable future. ITEM 3. LEGAL PROCEEDINGS ------- ----------------- Indemnification Matters The Company, along with several other entities, in a prior year guaranteed a performance bond of Separation relating to the Port of Baltimore contract. The Company was notified on June 28, 2000 that the performance bond is being called. It is not known, at this time, the amount, if any, the Company's share of liability will be. As of April 15, 2006, no litigation has been filed against the Company, or any of the Company's subsidiaries with respect to this indemnification issue. The Company is currently investigating all of the relevant facts and circumstances in connection with the Surety's potential claim or cause of action. No amount has been recorded in the financial statements as the Company is unable to determine a loss amount, if any, on the issue of indemnification. Incidental Matters ------------------ The Company and its subsidiaries are involved in ordinary, routine litigation incidental to the conduct of their business. Management believes that none of this litigation, individually or in the aggregate, is material to the Company's financial condition or results of operations. 38 ITEM 4. SUBMISSION OF MATTERS TO A VOTE OF SECURITY HOLDERS. ------- ---------------------------------------------------- Note: Share information presented in Item 14 is not adjusted for the 1:20 reverse split effective August 29, 2005. Commodore Applied Technologies, Inc. (CXII:OTCBB) 2003 Annual Meeting Results The Fitzpatrick Hotel 687 Lexington Avenue, New York, NY 10015 February 8, 2005 - 11:00 a.m. EST -------------------------------------------------------------------------------- Number of Outstanding Shares - 134,346,053 Shares Eligible to Vote - 130,908,553 Shares Voted in Person or by Proxy - 122,364,910 (93.41%) This Report indicates that stockholders owning a majority of the issued and outstanding shares of the Company's Common Stock have voted: 1. to elect Bentley J. Blum, Shelby T. Brewer, Frank E. Coffman, James M. DeAngelis, Paul E. Hannesson, O. Mack Jones, VADM Michael P. Kalleres and William A. Wilson as Directors; 2. to authorize our Board of Directors in its discretion, to amend our Certificate of Incorporation to effect a reverse stock split in a ratio of between 1-for-10 and 1-for-20, without further approval of our stockholders; and 3. to ratify Tanner + Co. as the Company's independent auditors for the year ended December 31, 2004. REPORT OF INSPECTORS OF ELECTION -------------------------------- David Rillera and Thomas Kamish certified that they were the duly appointed Inspectors of Election for the Annual Meeting of Stockholders held on February 8, 2005 (the "Meeting") of Commodore Applied Technologies, Inc., a Delaware corporation, and that the results of the votes cast at the Meeting were as follows: PROPOSAL 1. Election of Directors ----------- --------------------- For Withheld ----------------- ------------------ Bentley J. Blum 120,830,686 98.7% 1,534,224 1.3% ----------------- ------------------ Shelby T. Brewer, PhD 121,407,115 99.2% 957,795 0.8% ----------------- ------------------ Frank E. Coffman, PhD 120,994,640 98.5% 1,370,270 1.1% ----------------- ------------------ James M. DeAngelis 120,018,765 98.1% 2,346,145 1.9% ----------------- ------------------ Paul E. Hannesson 120,935,901 98.8% 1,429,009 1.2% ----------------- ------------------ O. Mack Jones 120,935,701 98.8% 1,429,209 1.2% ----------------- ------------------ VADM Michael P. Kalleres 120,997,190 98.9% 1,367,720 1.1% ----------------- ------------------ William A. Wilson 120,996,190 98.9% 1,368,720 1.1% ----------------- ------------------ 39 PROPOSAL 2. To authorize our board of directors in its discretion, to amend our certificate of incorporation to effect a reverse stock split in a ratio of between 1-for-10 and 1-for-20, without further approval of our stockholders. For Against Abstain -------------------- ------------------ ------------------- 111,466,595 85.1% 10,841,095 8.3% 57,220 -------------------- ------------------ ------------------- PROPOSAL 3. Ratification of Appointment of Tanner + Co. as Commodore's Independent Auditors for the Year Ending December 31, 2004. For Against Abstain -------------------- --------------- -------------------- 120,688,393 99.75% 298,317 0.25% 1,378,260 -------------------- --------------- -------------------- 40 PART II -------- ITEM 5. MARKET FOR REGISTRANT'S COMMON EQUITY A ND RELATED STOCKHOLDER MATTERS ----------------------------------------------------------------------- AND ISSUER PURCHASES OF EQUITY SECURITIES. ------------------------------------------ MARKET INFORMATION On June 28, 1996, the Company issued common stock and warrants at initial public offering prices of $6.00 per share and $0.10 per warrant. The Company's warrants, previously extended from June 16, 2001, expired on June 16, 2002. On March 6, 2003, the Common Stock ceased to be listed on the American Stock Exchange ("AMEX") and began trading in the over-the-counter market in the so-called "pink sheets" of the National Quotation Bureau, Inc. and the OTC Bulletin Board of the National Association of Securities Dealers, Inc. (the "OTC Bulletin Board or OTCBB"), where it is currently traded under the symbol CXII. On August 29, 2005, at the close of business, the Company effectuated the previously approved reverse stock split with the established ratio of 1-for 20. Applied common stock began trading on a reverse-split basis on August 30, 2005. As a result of the reverse stock split, every 20 shares of Applied common stock were combined into one share of Applied common stock. As a result of the reverse stock split, the issued and outstanding shares of Applied common stock were reduced from approximately 156 million shares to approximately 7.8 million shares. The number of authorized shares is not reduced. Shares of Applied common stock trade on the Nasdaq Over the Counter Bulletin Board Market under the symbol CXIA. As of March 31, 2006, there were 283 record holders of the Company's common stock. The following table sets forth, for the fiscal periods shown, the high and low sale prices (rounded to the nearest cent) for the Company's common stock as reported on the AMEX (prior to March 6, 2003) and on the OTCBB (after March 6, 2003). Common Stock ---------------- High Low ---- --- Fiscal 2005 First Quarter.......................... $0.34 $0.12 Second Quarter......................... 0.21 0.10 Third Quarter.......................... 0.30 0.12 Fourth Quarter......................... 0.27 0.09 Fiscal 2004 First Quarter.......................... $0.60 $0.20 Second Quarter......................... 1.00 0.40 Third Quarter.......................... 0.60 0.40 Fourth Quarter......................... 0.40 0.20 All stock quotes have been adjusted for the 1 for 20 reverse split of the Company's common stock on August 29, 2005. 41 ISSUANCE OF COMMON STOCK SUBSEQUENT TO DECEMBER 31, 2005 None. DIVIDEND INFORMATION Exchange Agreement of Series E Preferred Stock and Series F Preferred Stock On April 12, 2005, the Company authorized the issuance of 550,000 shares of Series I Convertible Preferred Stock ("Series I Preferred"), par value $0.001 per share, each such share of Series I Preferred having a stated value of $10.00 per share. These preferred shares are convertible into common stock at the rate of the average closing price of the Company's common stock for the previous ten trading days, and the conversion rate is not to exceed $0.57 per share. Non-cumulative dividends accrue at ten percent, and will be payable quarterly beginning February 2006. The Company has reserved 3,750,000 shares of common stock for the potential conversion of the Series I Convertible Preferred Stock into common stock. Also on April 12, 2005, a Series E and F preferred stockholder agreed to exchange all of their Series E and F preferred stock and all accrued and unpaid dividends thereon, for 395,302 shares of Series I Convertible Preferred Stock. Effective October 1, 2005, 388,302 shares of Series I Preferred were exchanged for 388,302 shares of Series J Preferred. The preferred stockholder has 0 shares of Series I preferred stock at December 31, 2005. Exchange Agreement of Series I Preferred Stock for Series J Preferred Stock Effective October 1, 2005, the Company authorized the issuance of 550,000 shares of Series J Convertible Preferred Stock ("Series J Preferred"), par value $0.001 per share, each such share of Series J Preferred having a stated value of $10.00 per share. These preferred shares are convertible into common stock at the rate of the average closing price of the Company's common stock for the previous ten trading days, and the conversion rate no less than $0.05 and no more than $0.50 per share. Non-cumulative dividends accrue at ten percent, and will be payable quarterly beginning February 2006. The Company has reserved 40,000,000 shares of common stock for the potential conversion of the Series J Convertible Preferred Stock and the Amended and Restated Shaar Note into common stock. Also, effective October 1, 2005, a Series I Preferred stockholder agreed to exchange 388,302 shares of their Series I Preferred, excluding all accrued and unpaid dividends thereon, for 388,302 shares of Series J Preferred. The preferred stockholder has 388,302 shares of Series J Preferred at December 31, 2005. Series H Preferred Stock ------------------------ The holders of the Company's Series H Convertible Preferred Stock, par value ($0.001) per share (the "Series H Preferred"), are entitled to a dividend rate of 3% over the term of the securities. Through December 31, 2005, the Company had not paid cash dividends and the Company has accrued $80,789 in unpaid dividends. The Company has the option to pay the dividends accrued in all periods in additional shares of Series H Preferred. 42 Series I Preferred Stock ------------------------ The holders of the Company's Series I Convertible Preferred Stock, par value ($0.001) per share (the "Series I Preferred"), are entitled to a dividend of 10% over the term of the securities. Through December 31, 2005, the Company has accrued $183,697 in unpaid dividends. The Company has the option to pay the dividends accrued in all periods after March 31, 2006 in the Company's common stock rather than cash. During 2005 the Company has not paid any of the accrued dividends on all of the converted Series I Preferred shares to date. Series J Preferred Stock ------------------------ The holders of the Company's Series J Convertible Preferred Stock, par value ($0.001) per share (the "Series J Preferred Stock"), are entitled to a dividend of 10% over the term of the securities. Through December 31, 2005, the Company has accrued $96,632 in unpaid dividends. The Company has the option to pay the dividends accrued in all periods after March 31, 2006 in the Company's common stock rather than cash. During 2005, no shares of the Company's Series J Preferred Stock were converted. Common Stock ------------ The Company has never paid cash dividends on its common stock. Any future determination by the Board of Directors of the Company with respect to the payment of cash dividends on the common stock of the Company will depend on the ability of the Company to service its outstanding indebtedness, the Company's future earnings, capital requirements, the financial condition of the Company and such other factors as the Company's Board of Directors may consider. The Company currently intends to retain its earnings, if any, to finance the growth and development of its business, to repay outstanding indebtedness and does not anticipate paying cash dividends on its common stock in the foreseeable future. 43 RECENT SALES OF UNREGISTERED SECURITIES Exchange Agreement of Series I Preferred Stock for Series J Preferred Stock Effective as of October 1, 2005, the Company authorized the issuance of 550,000 shares of Series J Convertible Preferred Stock ("Series J Preferred"), par value $0.001 per share, each such share of Series J Preferred having a stated value of $10.00 per share. The Series J Preferred shall have the following rights, privileges, and limitations: a) The conversion feature shall be exercisable immediately. b) The conversion price of the Series J Preferred shall be determined by the average closing price of Company's common stock in the previous 10 trading days, but in no event shall the conversion price be more than $0.50 per share or less than $0.05 per share. c) If the Company's common stock is not listed on an exchange at the time of the conversion, then the conversion price will be 50% of the market price at that time. d) The Series J Preferred shall have a non-cumulative annual dividend of 10%, payable in cash or shares of the Company's common stock at the Company's election. e) Dividend will be paid quarterly commencing March 31, 2006, to the Holders of record of shares of the Series J Preferred Stock. f) The Company has reserved 40,000,000 shares of its common stock for the conversion of the Series J Preferred and the Amended New Shaar Convertible Note. Effective as of October 1, 2005, the Company entered into an exchange agreement with The Shaar Fund, LTD (the "New Shaar Exchange Agreement"). Under terms of the New Shaar Exchange Agreement, the Company agreed that Shaar will exchange all of its right, title and interest in and to the remaining outstanding shares of the Series I Preferred (excluding all other accrued and unpaid dividends thereon) for 388,302 shares of the Company's Series J Preferred. See "MD&A - Liquidity and Capital Resources." 2005 Amended New Shaar Convertible Note Effective as of October 1, 2005, Shaar and the Company have agreed to amend the New Shaar Convertible Note (the "Amended New Shaar Convertible Note"). The Amended New Shaar Convertible Note shall have the following rights, privileges, and limitations: a) The Amended New Shaar Convertible Note bears an interest rate of 10% per annum, which is payable in cash or shares of the Company's common stock at the Company's election. b) Interest shall accrue on the principal amount for a one year period ("Deferral Period"). On March 22, 2006, the Company will owe a single lump sum payment to the holder in an amount equal to all interest that accrued during the Deferral Period. This lump sum payment has not been made as of April 17, 2006. c) Beginning April 15, 2006, and monthly thereafter on the 15th day of each month until March 22, 2009 ("Maturity Date"), the Company shall pay to Shaar all accrued and unpaid interest ("Interest 44 Payments")on the principal balance of the note accruing during the prior month. d) On the Maturity Date, the Company shall make a single lump sum payment to Shaar equal to the outstanding principal balance of the Amended New Shaar Convertible Note ("Principal Balance"), together with all accrued and unpaid interest. e) At the option of Shaar, the outstanding Principal Balance may be converted, either in whole or in part, into shares of the Company's common stock. f) The conversion price of the payment of the Principal Balance, the Deferral Period, and the Interest Payments shall be determined by the average closing price of Company's common stock in the 10 trading days preceding the conversion date, but in no event shall the conversion price be more than $0.50 per share or less than $0.05 per share ("Conversion Price"). g) If the Company's common stock is not listed on an exchange at the time of the conversion, then the conversion price will be 50% of the market price at that time. h) The Amended New Shaar Convertible Note may not be prepaid by the Company prior to the Maturity Date. i) The Company has reserved 40,000,000 shares of its common stock for the conversion of the Amended New Shaar Convertible Note and the Series J Preferred. 2005 Exchange Agreement of Series E Preferred Stock and Series F Preferred Stock Effective as of April 12, 2005, the Company authorized the issuance of 550,000 shares of Series I Convertible Preferred Stock ("Series I Preferred"), par value $0.001 per share, each such share of Series I Preferred having a stated value of $10.00 per share. The Series I Preferred shall have the following rights, privileges, and limitations: a) The conversion feature shall be exercisable immediately. b) The conversion price of the Series I Preferred shall be determined by the average closing price of Company's common stock in the previous 10 trading days, but in no event shall the conversion price be more than $0.57 per share. c) If the Company's common stock is not listed on an exchange at the time of the conversion, then the conversion price will be 50% of the market price at that time. d) The Series I Preferred shall have a non-cumulative annual dividend of 10%, payable in cash or shares of the Company's common stock at the Company's election. e) Dividend will be paid quarterly commencing May 15, 2005, to the Holders of record of shares of the Series I Preferred Stock. Dividends until February 14, 2006 shall accrue but shall not be payable until February 15, 2006. f) The Company will reserve 3,750,000 shares of its common stock for the conversion of the Series I Preferred. Effective as of April 12, 2005, the Company entered into an exchange agreement with The Shaar Fund, LTD (the "Shaar Exchange Agreement"). Under terms of the Shaar Exchange Agreement, the Company agreed that Shaar will exchange all of its right, title and interest in and to the remaining outstanding shares of the Series E Preferred and Series F Preferred (including all other accrued and unpaid dividends thereon) for 395,302 shares of the Company's Series I Preferred. Effective October 1, 2005, 388,302 shares of Series I Preferred were exchanged for 388,302 shares of Series J Preferred 45 April 2005 New Shaar Convertible Note Additionally, under the Shaar Exchange Agreement, the Company issued an Amended and Restated Secured Promissory Note of the Company, amending and restating a note originally issued June 13, 2001, which such Note has an outstanding principal balance as of April 12, 2005 of $3,251,585.35 ("Old Shaar Note"). Effective as of April 12, 2005 Shaar executed a purchase agreement ("Milford Capital Purchase Agreement") to Milford Capital & Management ("Milford"). In accordance with the terms of the Milford Capital Purchase Agreement, Shaar purchased a secured promissory note of the Company, initially issued to Milford on June 13, 2001, in the original principal amount of $500,000, which had an outstanding principal balance on March 31, 2005 of $188,149 ("Old Milford Note"), together with (i) all interest, additional obligations, forbearance fees, exit fees, penalties and other amounts due and payable from time to time under or in connection with the Old Milford Note, and (ii) the Forbearance Amount in connection with the Forbearance Agreement, dated January 30, 2004, between Milford and the Company, and Shaar in which Shaar agreed to forgive payment from the Company to Shaar of $300,000 of accrued and unpaid dividends on shares of the Company's Series E Preferred held by Shaar ("Forgiven Dividends") and consented to the transfer of the dollar value of the Forgiven Dividends to Milford as part of the forbearance fee payable to Milford under the Forbearance Agreement of 2004. Shaar and the Company have agreed that Shaar will exchange the outstanding principal amount of the Old Shaar Note and the Old Milford Note (including all accrued and unpaid interest, unpaid fees and Forgiven Dividends) for the Company's newly issued 10% convertible secured promissory note (the "New Shaar Convertible Note"). The New Shaar Convertible Note shall have the following rights, privileges, and limitations: a) The New Shaar Convertible Note bears an interest rate of 10% per annum, which is payable in cash or shares of the Company's common stock at the Company's election. b) Interest shall accrue on the principal amount for a one year period ("Deferral Period"). On March 22, 2006, the Company will owe a single lump sum payment to the holder in an amount equal to all interest that accrued during the Deferral Period. This lump sum payment has not been made as of April 17, 2006. c) Beginning April 15, 2006, and monthly thereafter on the 15th day of each month until March 22, 2009 ("Maturity Date"), the Company shall pay to Shaar all accrued and unpaid interest ("Interest Payments")on the principal balance of the note accruing during the prior month. d) On the Maturity Date, the Company shall make a single lump sum payment to Shaar equal to the outstanding principal balance of the New Shaar Convertible Note ("Principal Balance"), together with all accrued and unpaid interest. e) At the option of Shaar, the outstanding Principal Balance may be converted, either in whole or in part, into shares of the Company's common stock. f) The conversion price of the payment of the Principal Balance, the Deferral Period, and the Interest Payments shall be determined by the average closing price of Company's common stock in the 10 46 trading days preceding the conversion date,, but in no event shall the conversion price be more than $0.57 per share ("Conversion Price"). g) If the Company's common stock is not listed on an exchange at the time of the conversion, then the conversion price will be 50% of the market price at that time. h) The New Shaar Convertible Note may not be prepaid by the Company prior to the Maturity Date. On April 27, 2005, a private investor purchased $100,000 of the Company's common stock at the market price. The Company issued the private investor 500,000 shares of common stock of the Company as a result of the equity purchase. In connection with the purchase of the shares of the Company's common stock, the Company issued the private investor a 3-year warrant for 200,000 shares of the Company's common stock at an exercise price of $0.20 per share. The Company believes that this transaction is exempt from the registration requirements of the Securities Act under Section 4(2) thereof as a transaction not involving any public offering of securities. See "Liquidity and Capital Resources." The recipients of securities in the transactions described above represented their intention to acquire the securities for investment only and not with a view to, or for sale in connection with, any distribution thereof, and appropriate restrictive legends were affixed to the certificates or warrants representing the securities issued in this transaction. The Company made available to the recipients, written information about the Company in accordance with Rule 502 of the Securities Act and advised such recipient of the limitations on resale of such securities. In addition, the recipients were offered the opportunity, prior to exchanging and/or purchasing any securities, to ask questions of, and receive answers from, the Company concerning the terms and conditions of the transaction and to obtain additional relevant information about the Company. Based upon the facts above, the Company believed these transactions to be exempt from the registration requirements of the Securities Act in reliance on Section 4 (2) thereof as a transaction not involving any public offering of securities. 47 ITEM 6. SELECTED FINANCIAL DATA. ------- ------------------------ The following table presents selected financial data of the Company, as of December 31, 2005, 2004, 2003, 2002 and 2001 and for the years then ended. The following selected historical data is derived from the Company's Consolidated Financial Statements and should be read in conjunction with "Management's Discussion and Analysis of Financial Condition and Results of Operations" and the Company's Consolidated Financial Statements and Notes thereto included elsewhere in this Annual Report. Consolidated Statement of Operations Data: (in thousands, except per share data) 2001 2002 2003 2004 2005 ------------ ----------- ---------- ------------ ------------ Revenue: Contract revenues............... $ 4,590 $ 3,710 $ 660 $ 738 $ 10,275 Cost of sales: Cost of revenues................ 3,369 2,108 811 919 9,132 Research and development........ 423 297 70 9 5 General and administrative...... 2,420 1,792 1,700 1,674 2,072 Depreciation and amortization... 658 314 267 136 54 Impairment of Machinery 776 -- -- -- -- Impairment of Patents 627 -- -- -- -- ---------------------------------------------------------------------- Loss from operations................ (3,683) (801) (2,188) (2,000) (988) ---------------------------------------------------------------------- Interest income................. 38 -- -- -- -- Interest expense................ (226) (104) (769) (404) (1,183) Net gain (loss) on embedded derivative liability -- -- -- -- (543) Equity in net losses of subsidiary. (295) -- -- -- -- ---------------------------------------------------------------------- Loss before income taxes ........... (4,166) (905) (2,957) (2,404) (2,714) ---------------------------------------------------------------------- Income taxes.................... -- - -- -- -- Loss on disposal of discontinued operations -- (4,134) -- -- -- Loss gain from discontinued operations (2,388) (933) -- -- -- ---------------------------------------------------------------------- Net loss ........................... $ (6,554) $ (5,972) $ (2,957) $ (2,404) $ (2,714) Deemed dividends accrued to preferred stockholders (408) (528) (374) (291) (4,067) Net loss applicable to common shareholders (6,962) (6,500) (3,331) (2,695) (6,781) Net loss per share -- basic and diluted $ (2.62) $ (2.25) $ (.72) $ (.43) $ (0.93) Weighted average number of shares (000's) --------------------------------------------------- basic and diluted.............. 2,662 2,889 4,602 6,334 7,309 Consolidated Balance Sheet Data: (in thousands) 2001 2002 2003 2004 2005 ------------ ----------- ---------- ------------ ------------ Cash and cash equivalents......... $ 170 $ 59 $ -- $ 15 $ 65 Assets held for sale - DRM........ 29,407 -- -- -- -- Total assets...................... 31,200 736 246 369 2,417 Long term debt.................... -- 431 1,575 3,034 5,426 Liabilities held for sale - DRM... 22,165 -- -- -- -- Total liabilities................. 29,629 5,025 6,898 9,697 12,281 Stockholders' (deficit) equity.... 1,571 (4,289) (6,652) (9,328) (9,864) 48 ITEM 7. MANAGEMENT'S DISCUSSION AND ANALYSIS OF FINANCIAL CONDITION AND RESULTS ------- ----------------------------------------------------------------------- OF OPERATIONS. -------------- OVERVIEW The Company is engaged in providing a range of engineering and technical services to the public and private sectors related to (i) providing services related to, environmental management for on-site and off-site identification, investigation remediation and management of hazardous, mixed and radioactive waste; and (ii) remediating contamination in soils, liquids and other materials and disposing of or reusing certain waste by-products by utilizing SET. Through Advanced Sciences, formerly Advanced Sciences, Inc., a subsidiary acquired on October 1, 1996, the Company has contracts with various government agencies and private companies in the U.S. As some government contracts are funded in one-year increments, there is a possibility for cutbacks as these contracts constitute a major portion of Advanced Sciences' revenues, and such a reduction would materially affect the operations. However, management believes Advanced Sciences' existing client relationships will allow the Company to obtain new contracts in the future. The Company has access to technologies related to the separation and destruction of mixed waste, polychlorinated biphenyls (PCBs) and chlorofluorocarbons (CFCs). The Company is currently working on the commercialization of these technologies through development efforts, licensing arrangements and joint ventures. The Company has identified two reportable segments in which it operates, based on the guidelines set forth in the Financial Accounting Standards Board's Statement of Financial Accounting Standards No. 131. These two segments are as follows: Commodore Advanced Sciences, Inc., which primarily provides various environmental sampling, analysis and data management services to Government agencies on a lump sum and fixed cost basis; and Commodore Solutions, Inc., which is commercializing technologies to treat mixed and hazardous waste. The Company currently requires additional cash to sustain existing operations and to meet current obligations and ongoing capital requirements. The Company's current monthly operating expenses exceed cash revenues by approximately $80,000. Currently, the Company is addressing this cash shortfall through loans from The Shaar Fund, Ltd., but The Shaar Fund, Ltd. is under no obligation to continue to make such advances to the Company. If this lender decided to discontinue advances, the Company would not be able to meet its current obligations. In addition, the Company owes $888,000 in loans that are currently due or are payable on demand. Although the lenders on these loans have not yet called the loans, the Company does not currently have the ability to pay these loans absent additional financing. The report of our independent registered public accounting firm on our fiscal 2003, 2004 and 2005 consolidated financial statements contains a "going concern" qualification in which they express substantial doubt about our ability to continue in business. The Company currently requires additional cash to sustain existing operations and to meet current obligations and ongoing capital requirements. 49 CRITICAL ACCOUNTING POLICIES We prepare our financial statements in conformity with U.S. generally accepted accounting principles. As such, we are required to make certain estimates, judgments and assumptions that we believe are reasonable based upon the information available. These estimates and assumptions affect the reported amounts of assets and liabilities at the date of the financial statements and the reported amounts of revenues and expenses during the periods presented. Our accounting policies that are the most important to the portrayal of our financial condition and results, and which require the highest degree of management judgment relate to the reserves for doubtful accounts receivable and the valuation of stock and options issued for services. Reserves for Doubtful Accounts Management estimates the amount of required reserves for the potential non-collectibility of accounts receivable based upon the customer's financial condition, age of the customer's receivables, changes in payment histories, and consideration of other relevant factors. Because the reserve for doubtful accounts is an estimate of events that have not yet occurred, we could incur additional charges or benefits in the future to reflect differences between estimated and actual collections. Valuation of Stock, Options and Embedded Derivatives We value and account for the issuance of equity instruments, embedded or otherwise, to non-employees to acquire goods and services based on the fair value of the goods and services or the fair value of the equity instrument at the time of issuance, whichever is more reliably measurable. The fair value of stock issued for goods or services is determined based on the quoted market price on the date the commitment to issue the stock has occurred. The fair value of stock options, warrants granted to non-employees for goods or services is calculated on the date of grant using the Black-Scholes options pricing model. The fair value of the embedded derivatives consisting of conversion features included in a note payable and in the Series I Convertible Preferred Stock is calculated using the Black-Scholes options pricing model. Revenue Recognition Substantially all the Company's current revenues consist of engineering and scientific services performed for the U.S. Government and prime contractors that serve the U.S. Government under a variety of contracts, most of which provide for unit prices. Revenue under unit price contracts are recorded when the services are provided. Most of the Company's historical contracts provided for reimbursement of costs plus fixed fees. Direct and indirect contract costs incurred in reimbursement plus cost contracts are subject to audit by the Defense Contract Audit Agency ("DCAA"). Management does not expect these audits to materially affect the financial statements and has established appropriate allowances to cover potential audit disallowances. Contract revenues have been recorded in amounts which are expected to be realized upon final settlement. The DCAA has audited the Company's contracts through 1999. An allowance for potential disallowances is recorded as a reduction in revenue based upon the portion of billed and unbilled receivables that management believes may be disallowed upon audit by the DCAA. 50 RESULTS OF OPERATIONS Year ended December 31, 2005 compared to Year ended December 31, 2004 Revenues were $10,275,000 for the year ended December 31, 2005, compared to $738,000 for the year ended December 31, 2004. The increase in revenues is due to the increases in revenue contribution by Advanced Sciences as certain contracts were renewed and other contracts were initiated. In the case of Advanced Sciences, revenues were $10,189,000 for the year ended December 31, 2005, compared to $698,000 for the year ended 2004. Revenues in 2004 were primarily from engineering and scientific services performed for the United States government under two contracts similar to those in place in 2003. Advanced Sciences had four major customers in 2005, one of which represents more than 10% of annual revenue. The combined revenue for these four customers was $10,020,000 or 98% of the Company's total 2005 revenue. The increase in revenues at Advanced Sciences is primarily the result of the award of the EDAM contract, renewal of existing contracts, and overall, more subcontract work being performed in 2005. Cost of sales increased from $548,000 for 2004 to $9,078,000 for 2005. An increase in cost of sales at Advanced Sciences was the result of greater revenues due to the operation of the EDAM contract. The Company has a substantial backlog for a similar volume of work for the EDAM contract for the calendar year 2006. Revenues and associated expenses in relation to the EDAM contract are expected to be consistent with those observed in calendar year 2005. All other operating expenses remained constant as a direct result of operating efficiencies on the remaining contracts. Anticipated losses on contracts are provided for by a charge to income during the period such losses are first identified. In the case of Solution, revenues were $86,000 for the year ended December 31, 2005 as compared with $40,000 for the year ended December 31, 2004. The decrease is primarily due to the decrease in feasibility studies and commercial processing. Revenues in 2005 were primarily from remediation services performed for a scrap metal recycling company in the U.S. under a subcontract. Solution had one major customer which represented more than 10% of annual revenue. The revenue for this customer was $86,000 or 100% of the Solution's total 2005 revenue. The increase in revenues at Solution is primarily the result of marginally greater subcontract work being performed in 2005. Cost of sales was $54,000 for the year ended December 31, 2005 as compared to $371,000 for the year ended December 31, 2004. The decrease in cost of sales is attributable to less machinery and equipment refurbishment costs relating to the revenues produced for subcontract work being performed in 2005. Anticipated losses on engagements, if any, will be provided for by a charge to income during the period such losses are first identified. For the year ended December 31, 2005, the Company incurred research and development costs of $5,000, as compared to $9,000 for the year ended December 31, 2004. 100% of the research and development costs are attributable to the operations of Advanced Sciences in 2005 and Solutions in 2004. In 2005, the Company invested less money in laboratory work then it had in 2004. General and administrative expenses for the year ended December 31, 2005 were $2,072,000 as compared to $1,674,000 for the year ended December 31, 2004. This increase reflects the impact of the EDAM contract and some of the restructuring steps in the Company throughout 2005. 51 In the case of Advanced Sciences, general and administrative costs increased from $308,000 for the year ended December 31, 2004 to $618,000 for the year ended December 31, 2005. This increase reflects increased sales and marketing focus and the costs associated with Advanced Sciences bid and proposal efforts as Advanced Sciences continues to expand its contract base and seek new contracting opportunities. Solution incurred general and administrative costs of $16,000 for the year ended December 31, 2005 as compared with $120,000 for the year ended December 31, 2004. This decrease was primarily due to a decreased sales and marketing effort for Solution's services. All expenditures for the year ended December 31, 2005 were directly related to bid and proposal expenses, which may result in contracts that will produce revenue in 2006 and beyond. The increase in interest expense of $779,000 from 2004 to 2005 is primarily related to (i) greater balances on the Amended and Restated Shaar Note, (ii) higher balances on the Company's line of credit, and (iii) non-cash expenses related to the amortization of the embedded derivative debt discount on the associated convertible note payable. For the year ended December 31, 2005, the Company incurred a net loss of $2,714,000 as compared to a net loss of $2,404,000 for the year ended December 31, 2004. The increase in the net loss was a direct result of the recognition of non-cash expenses associated with the embedded derivative features concerning various financial instruments of the Company for the year ended December 31, 2005 compared to the year ended December 31, 2004. On April 11, 2005, Applied, through the issuance of the Series I Preferred and the Amended and Restated Shaar Note, recorded an embedded derivative liability due to the conversion feature of these financial instruments pursuant to SFAS No. 133 and EITF 00-19. Applied recorded a non-cash other expense of ($543,000) for the year ended December 31, 2005. The fair value of the embedded derivatives consisting of conversion features included in a note payable and in the Series I Convertible Preferred Stock is calculated using the Black-Scholes options pricing model. Effective as of October 1, 2005, the Company issued Series J Preferred in exchange for the Series I Preferred as well as further amending the Amended and Restated Shaar Note, and the Company reclassified the derivative liability into equity as a result of the changes. Overall, the Company has experienced significantly greater revenues and has improved its income/(loss) from operations from (988,000) to (2,000,000) for the year ended December 31, 2005 compared to the year ended December 31, 2004. Year ended December 31, 2004 compared to Year ended December 31, 2003 Revenues were $738,000 for the year ended December 31, 2004, compared to $660,000 for the year ended December 31, 2003. The increase in revenues is due to the increases in revenue contribution by Advanced Sciences as certain contracts were renewed and other contracts were initiated. In the case of Advanced Sciences, revenues were $698,000 for the year ended December 31, 2004, compared to $568,000 for the year ended 2003. Revenues in 2004 were primarily from engineering and scientific services performed for the United States government under two contracts similar to those in place in 2003. Advanced Sciences had two major customers in 2004, each of which represents more than 10% of annual revenue. The combined revenue for these two customers was $698,000 or 100% of the Company's total 2004 revenue. The increase in revenues at Advanced Sciences is primarily the result of the renewal of existing contracts and overall, more subcontract work being performed in 2004. Cost of sales decreased from $721,000 for 2003 to $548,000 for 2004. A reduction in cost of sales at Advanced Sciences resulted from greater operating 52 efficiencies on existing contracts and a reduction in overhead expenses. Anticipated losses on contracts are provided for by a charge to income during the period such losses are first identified. In the case of Solution, revenues were $40,000 for the year ended December 31, 2004 as compared with $92,000 for the year ended December 31, 2003. The decrease is primarily due to the decrease in feasibility studies and commercial processing. Revenues in 2004 were primarily from remediation services performed for a scrap metal recycling company in the U.S. under a subcontract. Solution had one major customer which represented more than 10% of annual revenue. The revenue for this customer was $40,000 or 100% of the Solution's total 2004 revenue. The decrease in revenues at Solution is primarily the result of less subcontract work being performed in 2004. Cost of sales was $371,000 for the year ended December 31, 2004 as compared to $90,000 for the year ended December 31, 2003. The increase in cost of sales is attributable to greater manufacturing costs of specialty equipment and sales expenses for the SET technology. Anticipated losses on engagements, if any, will be provided for by a charge to income during the period such losses are first identified. For the year ended December 31, 2004, the Company incurred research and development costs of $9,000, as compared to $70,000 for the year ended December 31, 2003. 100% of the research and development costs are attributable to the operations of Solution. In 2004, the Company invested more money in capital expenditures and less in laboratory work then it had in 2003. Advanced Sciences did not incur research and development costs in the years 2003 and 2004. General and administrative expenses for the year ended December 31, 2004 were $1,674,000 as compared to $1,700,000 for the year ended December 31, 2003. This decrease reflects the impact of some of the restructuring steps in the Company throughout 2004. In the case of Advanced Sciences, general and administrative costs decreased from $570,000 for the year ended December 31, 2003 to $308,000 for the year ended December 31, 2004. This decrease reflects the impact of some restructuring steps in Advanced Sciences (including principally a outsourcing of certain administrative functions) the Company made throughout 2004 to increase operating efficiencies. Solution incurred general and administrative costs of $120,000 for the year ended December 31, 2004 as compared with $73,000 for the year ended December 31, 2003. This increase was primarily due to an increased, focused sales and marketing effort for Solution's services, which may result in contracts that will produce revenue in 2005 and beyond. The decrease in interest expense of $365,000 from 2003 to 2004 is primarily related to lower, amortized non-cash interest costs associated with the Milford/Shaar Note and the Weiss Group Note and lower balances on the Company's line of credit. The Net Loss was $2,404,000 for the year ended December 31, 2004, compared to $2,957,000 for the year ended December 31, 2003. The decrease in the net loss was a result of increased revenues and the decreased interest expenses for the year ended December 31, 2004 compared to the year ended December 31, 2003. OFF-BALANCE SHEET ARRANGEMENTS There are no off-balance sheet arrangements, such as financing or variable interest entities, that either have, or are reasonably likely to have, a current or future material effect on financial condition, changes in financial 53 condition, revenues or expenses, results of operations, liquidity, capital expenditures or capital resources. QUARTERLY RESULTS OF OPERATIONS The following table sets forth certain unaudited quarterly statement of operations data for the last eight quarters. This information has been derived from our unaudited consolidated financial statements, which, in management's opinion, have been prepared on the same basis as the audited financial statements and include all adjustments, consisting only of normal recurring adjustments, necessary for a fair presentation of the information for the quarters presented. This information should be read in conjunction with the audited consolidated financial statements and related notes included elsewhere in this Form 10-K. The operating results for any quarter are not necessarily indicative of the operating results for any future period. Quarter Ended ------------------------------------------------------------------------ March 31, June 30, September 30, December 31, 2005 2005 2005 2005 -------------- ------------ ------------- ----------------- (unaudited) (In thousands, except per share data) Revenue $ 1,626 $ 2,733 $ 3,900 $ 2,016 Income (loss) from operations (329) (305) 151 (505) Net income available (loss applicable) to common stockholders (544) (5,114) (341) (782) Net income (loss) per common share: Basic & diluted $ (0.08) $ (0.69) $ (0.04) $ (0.10) Weighted average basic common shares: Basic & diluted 6,817 7,442 7,819 7,830 Quarter Ended ------------------------------------------------------------------------ March 31, June 30, September 30, December 31, 2004 2004 2004 2004 -------------- ------------ ------------- ----------------- (unaudited) (In thousands, except per share data) Revenue $ 182 $ 112 $ 155 $ 289 Loss from operations (595) (681) (511) (213) Net income available (loss applicable) to common stockholders (746) (851) (699) (399) Net income (loss) per common share: Basic & diluted $ (0.13) $ (0.13) $ (0.11) $ (0.06) Weighted average basic common shares: Basic & diluted 5,929 6,362 6,364 6,558 Fluctuations in Quarterly Results Factors that may affect quarterly results include: 54 o the award and successful operation of the EDAM contract in Oak Ridge, TN; o the recognition of non-cash expenses associated with the embedded derivative from the conversion features on the Series I Preferred and the New Shaar Note; o the interest expense associated with the increased amounts of notes payables; o the introduction, development, timing, competitive pricing and market acceptance of our environmental services and those of our competitors; and o changes in general economic conditions that could affect customer expenditures for environmental services. The June 30, 2005 and September 30, 2005 information above varies from the amounts previously reported on Form 10Q/A and 10Q, respectively. Instead of recording the initial value of the embedded derivative of $8,603,000 as other expense, the above information records the embedded derivative as a debt discount of $4,361,000 and a deemed dividend of $3,702,000. The debt discount was amortized by $227,000 and $273,000 in the three months ended June 30, 2005 and September 30, 2005, respectively, in the above information. As a result of the factors listed above and elsewhere in the "Forward-Looking Statements" and "Risk Factors" sections of this Form 10-K, it is possible that in some future periods our results of operations may fall below management's expectations as well as the expectations of public market analysts and investors. If revenue falls below management's expectations in any quarter and we are unable to reduce expenses, our operating results will be lower than expected. LIQUIDITY AND CAPITAL RESOURCES At December 31, 2005 and December 31, 2004 Advanced Sciences had a $141,000 and $0 outstanding balance, respectively, on its two million dollar, receivables revolving line of credit. The line of credit is based on credit worthy receivables of Advanced Sciences. The Company currently requires additional cash to sustain existing operations and to meet current obligations and ongoing capital requirements. The Company's current monthly operating expenses exceed cash revenues by approximately $80,000 at December 31, 2005. Currently, the Company is addressing this cash shortfall though loans from The Shaar Fund, Ltd., but The Shaar Fund, Ltd. is under no obligation to continue to make such advances to the Company. If this lender decided to discontinue advances, the Company would not be able to meet its current obligations. In addition, the Company owes $888,000 in loans that are currently due or are payable on demand as of March 31, 2006. Although the lenders on these loans have not yet called the loans, the Company does not currently have the ability to pay these loans absent additional financing. The Company has experienced a significant increase in total assets for the year ended December 31, 2005. The majority of the increase was in accounts receivable, net. Accounts receivable, net, for the period ended December 31, 2005 was $2,065,000 as compared to $259,000 for the year ended December 31, 2004. The increase in accounts receivable, net, is due to the increases in revenue contribution by Advanced Sciences by the EDAM contract in Oak Ridge, TN. Approximately 90% of the accounts receivable, net, figure has been collected within 45 days of the period ended December 31, 2005. The remaining approximate 10% of the accounts receivable, net, amounts are deemed retainage by the Company's main client, Bechtel Jacobs, and is released to the Company on a periodic basis when the Company completes certain work orders that the retainage has been applied to. The report of our independent registered public accounting firm on our fiscal 2003, 2004 and 2005 consolidated financial statements contains a "going concern" qualification in which they express substantial doubt about our ability to continue in business. The Company currently requires additional cash to sustain existing operations and to meet current obligations and ongoing capital requirements. For the year ended December 31, 2005, the Company incurred a net loss of $2,714,000 as compared to a net loss of $2,404,000 for the year ended December 31, 2004. The increase in the net loss was a direct result of the recognition of non-cash expenses associated with the embedded derivative 55 features concerning various financial instruments of the Company for the year ended December 31, 2005 compared to the year ended December 31, 2004. On April 11, 2005, Applied, through the issuance of the Series I Preferred and the Amended and Restated Shaar Note, recorded an embedded derivative liability due to the conversion feature of these financial instruments pursuant to SFAS No. 133 and EITF 00-19. Applied recorded a non-cash other expense of ($543,000) for the year ended December 31, 2005. The fair value of the embedded derivatives consisting of conversion features included in a note payable and in the Series I Convertible Preferred Stock is calculated using the Black-Scholes options pricing model. Effective as of October 1, 2005, the Company issued Series J Preferred in exchange for the Series I Preferred as well as further amending the Amended and Restated Shaar Note, and the Company reclassified the derivative liability into equity as a result of the changes. Overall, the Company has experienced significantly greater revenues and has improved its income/(loss) from operations from (988,000) to (2,000,000) for the year ended December 31, 2005 compared to the year ended December 31, 2004. As shown in the consolidated financial statements for the years ended December 31, 2005, 2004, and 2003, the Company incurred losses of $2,714,000, $2,404,000, and $2,957,000, respectively. The Company has also experienced net cash inflows (outflows) from operating activities of ($1,337,000), ($1,532,000), and ($955,000) for the years ended December 31, 2005, 2004 and 2003 respectively. At December 31, 2005 and 2004 the Company had working capital (deficit) of ($4,586,000) and ($6,389,000) respectively. The decrease in the working capital deficit from December 31, 2004 to December 31, 2005 is mainly due to the decrease in Company's loss from operations from the operation of the EDAM contract. As shown in the consolidated financial statements for the years ended December 31, 2005 and 2004 the Company had stockholders' (deficit) equity of ($9,864,000) and ($9,328,000) respectively. The Company's net increase in stockholders' deficit from December 31, 2004 to December 31, 2005 is primarily due to the loss for the year ended December 31, 2005. On April 11, 2005, Applied, through the issuance of the Series I Preferred and the Amended and Restated Shaar Note, recorded an embedded derivative liability due to the conversion feature of these financial instruments pursuant to SFAS No. 133 and EITF 00-19. Applied recorded a non-cash other expense of ($543,000) for the year ended December 31, 2005. The fair value of the embedded derivatives consisting of conversion features included in a note payable and in the Series I Convertible Preferred Stock is calculated using the Black-Scholes options pricing model. Effective as of October 1, 2005, the Company issued Series J Preferred in exchange for the Series I Preferred as well as further amending the Amended and Restated Shaar Note, and the Company reclassified the derivative liability into equity as a result of the changes. Overall, the Company has experienced significantly greater revenues and has improved its income/(loss) from operations from (988,000) to (2,000,000) for the year ended December 31, 2005 compared to the year ended December 31, 2004. On August 29, 2005, at the close of business, the Company effectuated the previously approved reverse stock split with the established a ratio of 1-for 20. Applied common stock began trading on a reverse-split basis on August 30, 2005. As a result of the reverse stock split, every 20 shares of Applied common stock were combined into one share of Applied common stock. As a result of the reverse stock split, the issued and outstanding shares of Applied common stock were reduced from approximately 156 million shares to approximately 7.8 million shares. The number of authorized shares is not reduced. The effects of the reverse split have been presented retroactively. 56 The reverse stock split affected all shares of common stock, stock options and warrants of Applied outstanding as of immediately prior to the effective time of the reverse stock split. Fractional shares of common stock of the Company were not issued as a result of the reverse stock split, but instead, holders of pre-split shares of common stock who otherwise would have been entitled to receive a fractional share as a result of the reverse split received one whole share. Shares of Applied common stock trade on the Nasdaq Over the Counter Bulletin Board Market under the symbol CXIA. Certain prior-year amounts have been reclassified to conform to the current year presentation. For the Year ended December 31, 2005, the Company issued 291,707 shares of the Company's common stock upon conversion of 5,500 shares of Series E Preferred by the holders thereof. No shares of the Company's Series F Preferred were converted for the year ended December 31, 2005. For the year ended December 31, 2005, the Company accrued all dividends payable on the Series E Preferred and the Series F Preferred Stock. On April 12, 2005, the Company entered into an exchange agreement with The Shaar Fund, LTD (the "Shaar Exchange Agreement"). Under terms of the Shaar Exchange Agreement, the Company agreed that Shaar will exchange all of its right, title and interest in and to the remaining outstanding shares of the Series E Preferred and Series F Preferred (including all other accrued and unpaid dividends thereon) for 395,302 shares of the Company's Series I Preferred. Effective October 1, 2005, 388,302 shares of Series I Preferred were exchanged for 388,302 shares of Series J Preferred For the Year ended December 31, 2005, the Company issued 439,206 shares of the Company's common stock upon conversion of 7,000 shares of Series I Preferred by the holders thereof. For the year ended December 31, 2005, the Company paid no dividends on the Series I Preferred Stock. The Company accrued dividends on the Series I Preferred for the year ended December 31, 2005 of $183,696, which is included in Other Accrued Liabilities. Effective October 1, 2005, the Company entered into an exchange agreement with The Shaar Fund, LTD (the "New Shaar Exchange Agreement"). Under terms of the Shaar Exchange Agreement, the Company agreed that Shaar will exchange all of its right, title and interest in and to 388,302 shares of the Series I Preferred (excluding all other accrued and unpaid dividends thereon) for 388,302 shares of the Company's Series J Preferred. For the year ended December 31 2005, the Company converted no shares of Series H Preferred and issued no stock with respect to accrued dividends pertaining to the Series H Preferred. For the year ended December 31, 2005, the Company paid no dividends on the Series H Preferred Stock. The Company accrued dividends on Series H Preferred for the year ended December 31, 2005 of $24,000, which is included in Other Accrued Liabilities. For the year ended December 31 2005, the Company converted no shares of Series J Preferred and issued no stock with respect to accrued dividends pertaining to the Series J Preferred. For the year ended December 31, 2005, the Company paid no dividends on the Series J Preferred. The Company accrued dividends on Series J Preferred for the year ended December 31, 2005 of $96,632, which is included in Other Accrued Liabilities. In November 2000, the Company completed $500,000 in financing in the form of a loan (the "Weiss Group Note") from a group of four investors. The Weiss Group Note bears interest at 12% per annum and was due and payable on 57 February 12, 2001. All holders of the Weiss Group Note have granted payment extensions to the Company until January 15, 2005 in exchange for warrants for 125,000 shares of the Company's common stock at an exercise price of $0.57. The current principal balance of the Weiss Group Note is $252,397 as of December 31, 2005 and remains unpaid as of April 15, 2006. Effective February 14, 2004, the members of the Weiss Group Note voluntarily cancelled all issued warrants to purchase 75,000 shares at an exercise price of $1.00 per share of the Company's common stock in connection with the Weiss Group Note. Effective February 15, 2004, the Company issued warrants to purchase 125,000 shares of its common stock at an exercise price of $0.57 per share to all holders of the Weiss Group Note in consideration of the extension of the due date of such loans by such persons from May 31, 2002 to January 15, 2005. The Company believes that this transaction is exempt from the registration requirements of the Securities Act under Section 4(2) thereof as a transaction not involving any public offering of securities. Mr. Blum, a director of the Company, provided cash installments in the form of a loan to the Company through February 2004 (the "Blum Demand Note"). The Blum Demand Note bears interest at 9% per annum and is payable on demand. The current principal balance of the Blum Demand Note is $312,032 as of December 31, 2005 and remains unpaid as of April 15, 2006. See "MD&A - Recent Sales of Unregistered Securities." On November 19, 2003, the Company issued a warrant to purchase 1,367,790 shares of its common stock at an exercise price of $0.57 per share (the closing price of our common stock on the OTCBB on such date) to the Blum Asset Trust, a company controlled by Bentley Blum, a Director of the Company, in consideration for the loans made to the Company and the usage of office space and personnel of the Blum Asset Trust over the last five years. The Company believes that this transaction is exempt from the registration requirements of the Securities Act under Section 4(2) thereof as a transaction not involving any public offering of securities. See "MD&A - Recent Sales of Unregistered Securities." On April 12, 2005, the Company authorized the issuance of 550,000 shares of Series I Convertible Preferred Stock ("Series I Preferred"), par value $0.001 per share, each such share of Series I Preferred having a stated value of $10.00 per share. The Series I Preferred shall have the following rights, privileges, and limitations: a) The conversion feature shall be exercisable immediately. b) The conversion price of the Series I Preferred shall be determined by the average closing price of Company's common stock in the previous 10 trading days, but in no event shall the conversion price be more than $0.57 per share. c) If the Company's common stock is not listed on an exchange at the time of the conversion, then the conversion price will be 50% of the market price at that time. d) The Series I Preferred shall have a non-cumulative annual dividend of 10%, payable in cash or shares of the Company's common stock at the Company's election. e) Dividend will be paid quarterly commencing May 15, 2005, to the Holders of record of shares of the Series I Preferred Stock. Dividends until February 14, 2006 shall accrue but shall not be payable until February 15, 2006. 58 f) The Company will reserve 3,750,000 shares of its common stock for the conversion of the Series I Preferred. On April 12, 2005, the Company entered into an exchange agreement with The Shaar Fund, LTD (the "Shaar Exchange Agreement"). Under terms of the Shaar Exchange Agreement, the Company agreed that Shaar will exchange all of its right, title and interest in and to the remaining outstanding shares of the Series E Preferred and Series F Preferred (including all other accrued and unpaid dividends thereon) for 395,302 shares of the Company's Series I Preferred. Effective October 1, 2005, 388,302 shares of Series I Preferred were exchanged for 388,302 shares of Series J Preferred See "MD&A - Recent Sales of Unregistered Securities." Additionally, under the Shaar Exchange Agreement, the Company issued an Amended and Restated Secured Promissory Note of the Company, amending and restating a note originally issued June 13, 2001, which such Note has an outstanding principal balance as of April 12, 2005 of $3,251,585.35 ("Old Shaar Note"). On April 11, 2005 The Shaar Fund, LTD ("Shaar") executed a purchase agreement ("Milford Capital Purchase Agreement") to Milford Capital & Management ("Milford"). In accordance with the terms of the Milford Capital Purchase Agreement, Shaar purchased a secured promissory note of the Company, initially issued to Milford on June 13, 2001, in the original principal amount of $500,000, which had an outstanding principal balance on March 22, 2005 of $188,149 ("Old Milford Note"), together with (i) all interest, additional obligations, forbearance fees, exit fees, penalties and other amounts due and payable from time to time under or in connection with the Old Milford Note, and (ii) the Forbearance Amount in connection with the Forbearance Agreement, dated January 30, 2004, between Milford and the Company, and Shaar in which Shaar agreed to forgive payment from the Company to Shaar of $300,000 of accrued and unpaid dividends on shares of the Company's Series E Preferred held by Shaar ("Forgiven Dividends") and consented to the transfer of the dollar value of the Forgiven Dividends to Milford as part of the forbearance fee payable to Milford under the Forbearance Agreement of 2004. Shaar and the Company have agreed that Shaar will exchange the outstanding principal amount of the Old Shaar Note and the Old Milford Note (including all accrued and unpaid interest, unpaid fees and Forgiven Dividends) for the Company's newly issued 10% convertible secured promissory note (the "New Shaar Convertible Note"). As described below, the New Shaar Convertible Note was amended on October 1, 2005. The New Shaar Convertible Note shall have the following rights, privileges, and limitations: a) The New Shaar Convertible Note bears an interest rate of 10% per annum, which is payable in cash or shares of the Company's common stock at the Company's election. b) Interest shall accrue on the principal amount for a one year period ("Deferral Period"). On March 22, 2006, the Company will make a single lump sum payment to the holder in an amount equal to all interest that accrued during the Deferral Period c) Beginning April 15, 2006, and monthly thereafter on the 15th day of each month until March 22, 2009 ("Maturity Date"), the Company shall pay to Shaar all accrued and unpaid interest ("Interest Payments")on the principal balance of the note accruing during the prior month. 59 d) On the Maturity Date, the Company shall make a single lump sum payment to Shaar equal to the outstanding principal balance of the New Shaar Convertible Note ("Principal Balance"), together with all accrued and unpaid interest. e) At the option of Shaar, the outstanding Principal Balance may be converted, either in whole or in part, into shares of the Company's common stock. f) The conversion price of the payment of the Principal Balance, the Deferral Period, and the Interest Payments shall be determined by the average closing price of Company's common stock in the 10 trading days preceding the conversion date,, but in no event shall the conversion price be more than $0.57 per share ("Conversion Price"). g) If the Company's common stock is not listed on an exchange at the time of the conversion, then the conversion price will be 50% of the market price at that time. h) The New Shaar Convertible Note may not be prepaid by the Company prior to the Maturity Date. On April 11, 2005, through the issuance of the Series I Preferred and the Amended and Restated Shaar Note, the Company recorded an embedded derivative liability due to the conversion feature of these financial instruments pursuant to ETIF 00-19. Applied recorded a loss of $543,000 of non-cash expense for the year ended December 31, 2005. On April 27, 2005, a private investor purchased $100,000 of the Company's unregistered common stock at the market price. The Company issued the private investor 500,000 shares of unregistered common stock of the Company as a result of the equity purchase. In connection with the purchase of the shares of the Company's common stock, the Company issued the private investor a 3-year warrant for 200,000 shares of the Company's common stock at an exercise price of $0.20 per share. The Company believes that this transaction is exempt from the registration requirements of the Securities Act under Section 4(2) thereof as a transaction not involving any public offering of securities. Effective as of October 1, 2005, the Company authorized the issuance of 550,000 shares of Series J Convertible Preferred Stock ("Series J Preferred"), par value $0.001 per share, each such share of Series I Preferred having a stated value of $10.00 per share. The Series J Preferred shall have the following rights, privileges, and limitations: a) The conversion feature shall be exercisable immediately. b) The conversion price of the Series J Preferred shall be determined by the average closing price of Company's common stock in the previous 10 trading days, but in no event shall the conversion price be more than $0.50 per share or less than $0.05 per share. c) If the Company's common stock is not listed on an exchange at the time of the conversion, then the conversion price will be 50% of the market price at that time. d) The Series J Preferred shall have a non-cumulative annual dividend of 10%, payable in cash or shares of the Company's common stock at the Company's election. e) Dividend will be paid quarterly commencing March 31, 2006, to the Holders of record of shares of the Series J Preferred Stock. f) The Company has reserved 40,000,000 shares of its common stock for the conversion of the Series J Preferred and the Amended New Shaar Convertible Note. 60 Effective as of October 1, 2005, the Company entered into an exchange agreement with The Shaar Fund, LTD (the "New Shaar Exchange Agreement"). Under terms of the New Shaar Exchange Agreement, the Company agreed that Shaar will exchange all of its right, title and interest in and to the remaining outstanding shares of the Series I Preferred (excluding all other accrued and unpaid dividends thereon) for 388,302 shares of the Company's Series J Preferred. Effective as of October 1, 2005, Shaar and the Company have agreed to amend the New Shaar Convertible Note (the "Amended New Shaar Convertible Note"). The Amended New Shaar Convertible Note shall have the following rights, privileges, and limitations: a) The Amended New Shaar Convertible Note bears an interest rate of 10% per annum, which is payable in cash or shares of the Company's common stock at the Company's election. b) Interest shall accrue on the principal amount for a one year period ("Deferral Period"). On March 22, 2006, the Company will make a single lump sum payment to the holder in an amount equal to all interest that accrued during the Deferral Period c) Beginning April 15, 2006, and monthly thereafter on the 15th day of each month until March 22, 2009 ("Maturity Date"), the Company shall pay to Shaar all accrued and unpaid interest ("Interest Payments")on the principal balance of the note accruing during the prior month. d) On the Maturity Date, the Company shall make a single lump sum payment to Shaar equal to the outstanding principal balance of the Amended New Shaar Convertible Note ("Principal Balance"), together with all accrued and unpaid interest. e) At the option of Shaar, the outstanding Principal Balance may be converted, either in whole or in part, into shares of the Company's common stock. f) The conversion price of the payment of the Principal Balance, the Deferral Period, and the Interest Payments shall be determined by the average closing price of Company's common stock in the 10 trading days preceding the conversion date, but in no event shall the conversion price be more than $0.50 per share or less than $0.05 per share ("Conversion Price"). g) If the Company's common stock is not listed on an exchange at the time of the conversion, then the conversion price will be 50% of the market price at that time. h) The Amended New Shaar Convertible Note may not be prepaid by the Company prior to the Maturity Date. i) The Company has reserved 40,000,000 shares of its common stock for the conversion of the Amended New Shaar Convertible Note and the Series J Preferred. The current principal balance of the New Shaar Note is $5,426,233 as of December 31, 2005 and remains unpaid as of April 15, 2006. The recipient of securities in this transaction represented its intention to acquire the securities for investment only and not with a view to, or for sale in connection with, any distribution thereof, and appropriate restrictive legends were affixed to the warrants and the certificates representing the shares issued in this transaction. The Company made available to The Shaar Fund Ltd., written information about the Company in accordance with Rule 502 of the Securities Act and advised such recipient of the limitations on resale of such securities. In addition, The Shaar Fund Ltd. was offered the opportunity, prior to exchanging and/or purchasing any securities, to ask 61 questions of, and receive answers from, the Company concerning the terms and conditions of the transaction and to obtain additional relevant information about the Company. Based upon the facts above, the Company believed this transaction to be exempt from the registration requirements of the Securities Act in reliance on Section 4 (2) thereof as a transaction not involving any public offering of securities. See "MD&A - Recent Sales of Unregistered Securities." The following table summarizes the Company's contractual obligations, maturities and commitments. See Notes 7 and 13 of the Notes to Consolidated Financial Statements for additional information regarding long-term debt and operating leases. ----------------------------- --------------- ----------------- ---------------- --------------- --------------- (amounts in thousands $) Less than More than 5 1 year 1-3 Years 3-5 Years years Total ----------------------------- --------------- ----------------- ---------------- --------------- --------------- Long-term debt and related party notes payable 888 - 5,426 - 6,314 ----------------------------- --------------- ----------------- ---------------- --------------- --------------- Operating leases 93 84 14 - 191 ----------------------------- --------------- ----------------- ---------------- --------------- --------------- Purchase obligations - - - - - ----------------------------- --------------- ----------------- ---------------- --------------- --------------- Other long-term liabilities - - - - - ----------------------------- --------------- ----------------- ---------------- --------------- --------------- 981 84 5,440 - 6,505 ----------------------------- --------------- ----------------- ---------------- --------------- --------------- The Company hopes to meet its short-term capital requirements (including its $80,000 monthly cash shortfall) through continued loans from The Shaar Fund, Ltd., although this lender is under no obligation to continue to make advances to the Company. The Company intends to negotiate a forbearance arrangement with other lenders on loans that are currently due. Ultimately, the Company intends to reduce its cash shortfall and intends to meet its long term capital needs through obtaining additional contracts that will generate funds from operations and obtaining additional debt or equity financing as necessary or engaging in merger or sale transactions. There can be no assurance that such sources of funds will be available to the Company or that it will be able to meet its short or long term capital requirements. NET OPERATING LOSS CARRYFORWARDS The Company has net operating loss carryforwards (the "NOLs") of approximately $39,000,000 as of December 31, 2005, which expire in the years 2010 through 2024. The amount of NOLs that can be used in any one year will be limited by the applicable tax laws that are in effect at the time such NOLs can be utilized. The unused NOLs balances may be accumulated and used in subsequent years. A full valuation allowance has been established to offset any benefit from the net operating loss carryforwards. It cannot be determined when or if the Company will be able to utilize the NOLs. NEW ACCOUNTING PRONOUNCEMENTS In February 2006, the Financial Accounting Standards Board ("FASB") issued SFAS No. 155, Accounting for Certain Hybrid Instruments ("SFAS 155"). SFAS 155 amends SFAS 133 and SFAS No. 140, Accounting for Transfers and Servicing of Financial Assets and Extinguishments of Liabilities ("SFAS 140"). SFAS 155 allows financial instruments that have embedded derivatives to be accounted for as a whole, eliminating the need to bifurcate the derivative from its host, if the holder elects to account for the whole instrument on a fair value basis. In addition, among other changes, SFAS 155 (i) clarifies which 62 interest-only strips and principal-only strips are not subject to the requirements of SFAS 133; (ii) establishes a requirement to evaluate interests in securitized financial assets to identify interests that are freestanding derivatives or that are hybrid financial instruments that contain an embedded derivative requiring bifurcation; (iii) clarifies that concentrations of credit risk in the form of subordination are not embedded derivatives; and (iv) eliminates the prohibition on a qualifying special-purpose entity ("QSPE") from holding a derivative financial instrument that pertains to a beneficial interest other than another derivative financial interest. SFAS 155 will be applied prospectively and is effective for all financial instruments acquired or issued for fiscal years beginning after September 15, 2006. SFAS 155 is not expected to have a material impact on the Company's consolidated financial statements. The FASB has issued additional guidance relating to derivative financial instruments as follows: In June 2005, the FASB cleared SFAS 133 Implementation Issue No. B38, Embedded Derivatives: Evaluation of Net Settlement with Respect to the Settlement of a Debt Instrument through Exercise of an Embedded Put Option or Call Option ("Issue B38") and SFAS 133 Implementation Issue No. B39, Embedded Derivatives: Application of Paragraph 13(b) to Call Options That Are Exercisable Only by the Debtor ("Issue B39"). Issue B38 clarified that the potential settlement of a debtor's obligation to a creditor occurring upon exercise of a put or call option meets the net settlement criteria of SFAS No. 133. Issue B39 clarified that an embedded call option, in which the underlying is an interest rate or interest rate index, that can accelerate the settlement of a debt host financial instrument should not be bifurcated and fair valued if the right to accelerate the settlement can be exercised only by the debtor (issuer/borrower) and the investor will recover substantially all of its initial net investment. Issues B38 and B39, which must be adopted as of the first day of the first fiscal quarter beginning after December 15, 2005, are not anticipate to have a material impact on the Company's consolidated financial statements. In March 2005, the FASB issued Interpretation No. 47, "Accounting for Conditional Asset Retirement Obligations", or "FIN 47," which clarifies that the term "conditional asset retirement obligation" as used in FASB statement No. 143, "Accounting for Asset Retirement Obligations". Conditional asset retirement obligation refers to a legal obligation to perform an asset retirement activity in which the timing and/or method of settlement are conditional on a future event that may or may not be within the control of the entity. An entity is required to recognize a liability for the fair value of a conditional asset retirement obligation if the fair value of the liability can be reasonably estimated. FIN 47 is effective for fiscal years ending after December 15, 2005. The Company does not expect the adoption of FIN 47 to have a material impact on our consolidated balance sheet or consolidated statement of cash flows. In May 2005, the Financial Accounting Standards Board, or "FASB," issued SFAS No. 154, Accounting Changes and Error Corrections. This statement replaces APB No. 20 and SFAS No. 3, and changes the requirements for the accounting for and reporting of a change in accounting principle. SFAS No. 154 requires retrospective application to prior periods' financial statements of changes in accounting principle. The statement defines retrospective application as the application of a different accounting principle to prior accounting periods as if that principle had always been used or as the adjustment of previously issued financial statements to reflect a change in the reporting entity. This statement shall be effective for accounting changes and correction of errors made in years beginning after December 15, 2005. Accordingly, we will adopt the provisions of SFAS No. 154 at the beginning of our 2006 fiscal year. 63 In December 2004, the FASB issued SFAS No. 123R, Share-Based Payment, which requires companies to measure and recognize compensation expense for all stock-based payments at fair value. SFAS 123R is effective for fiscal years beginning after June 15, 2005 and, thus, will be effective for the Company beginning with the fiscal year of 2006, as deferred. Early adoption is encouraged and retroactive application of the provisions of SFAS 123R to the beginning of the fiscal year that includes the effective date is permitted, but not required. The Company is currently evaluating the impact of SFAS 123R and the adoption may have a material impact on the Company's financial position and results of operations. See Stock Compensation in Note 1 for more information related to the pro forma effects on reported net loss and net loss per share of applying the fair value recognition provisions of the previous SFAS 123, Accounting for Stock-Based Compensation, to stock-based employee compensation. FORWARD-LOOKING STATEMENTS Certain matters discussed in this Annual Report are "forward-looking statements" intended to qualify for the safe harbors from liability established by Section 27A of the Securities Act and Section 21E of the Securities Exchange Act of 1934, as amended (the "Exchange Act"). These forward-looking statements can generally be identified as such because the context of the statement will include words such as the Company "believes," "anticipates," "expects" or words of similar import. Similarly, statements that describe the Company's future plans, objectives or goals are also forward-looking statements. Such statements may address future events and conditions concerning, among other things, the Company's results of operations and financial condition; the consummation of acquisition and financing transactions and the effect thereof on the Company's business; capital expenditures; litigation; regulatory matters; and the Company's plans and objectives for future operations and expansion. Any such forward-looking statements would be subject to the risks and uncertainties that could cause actual results of operations, financial condition, acquisitions, financing transactions, operations, expenditures, expansion and other events to differ materially from those expressed or implied in such forward-looking statements. Any such forward-looking statements would be subject to a number of assumptions regarding, among other things, future economic, competitive and market conditions generally. Such assumptions would be based on facts and conditions as they exist at the time such statements are made as well as predictions as to future facts and conditions, the accurate prediction of which may be difficult and involve the assessment of events beyond the Company's control. Further, the Company's business is subject to a number of risks and uncertainties that would affect any such forward-looking statements. These risks and uncertainties include, but are not limited to: o the Company's critical need for additional cash to sustain existing operations and meet existing obligations and capital requirements (the Company's auditor's opinion on our fiscal 2002, 2003, 2004 and 2005 financial statements contains a "going concern" qualification in which they express doubt about the Company's ability to continue in business, absent additional financing); 64 o the ability to generate profitable operations from a large scale remediation project; o the ability of the Company to renew its nationwide permit to treat PCBs; o the ability of the Company to implement its waste processing operations, including obtaining commercial waste processing contracts and processing waste under such contracts in a timely and cost effective manner; the timing and award of contracts by the U.S. Department of Energy for the cleanup of waste sites administered by it; o the timing and award of contracts by the U.S. Department of Energy for the cleanup of waste sites administered by it; o the acceptance and implementation of the Company's waste treatment technologies in the government and commercial sectors; o the Company's ability to obtain and perform under other large technical support services projects; developments in environmental legislation and regulation; o the ability of the Company to obtain future financing on favorable terms; and o other circumstances affecting anticipated revenues and costs. These risks and uncertainties could cause actual results of the Company to differ materially from those projected or implied by such forward-looking statements. ITEM 7A. QUANTITATIVE AND QUALITATIVE DISCLOSURES ABOUT MARKET RISK. ------- ----------------------------------------------------------- Not applicable. ITEM 8. FINANCIAL STATEMENTS AND SUPPLEMENTARY DATA. ------- -------------------------------------------- The consolidated financial statements of the Company are included on pages F-1 through F-36 of this Annual Report and are incorporated herein by reference. ITEM 9. CHANGES IN AND DISAGREEMENTS WITH ACCOUNTANTS ON ACCOUNTING AND ----------------------------------------------------------------------- FINANCIAL DISCLOSURE. --------------------- None. 65 ITEM 9A. CONTROLS AND PROCEDURES ------- ----------------------- (a) Evaluation of disclosure controls and procedures We maintain disclosure controls and procedures designed to ensure that information required to be disclosed in our reports filed under the Securities Exchange Act of 1934, as amended (the "Exchange Act"), is recorded, processed, summarized, and reported within the required time periods, and that such information is accumulated and communicated to our management, including our Chief Executive Officer and Chief Financial Officer, as appropriate, to allow for timely decisions regarding required disclosure. As required by Rule 13a-15(b) under the Exchange Act, we conducted an evaluation, under the supervision of our Chief Executive Officer and Chief Financial Officer, of the effectiveness of our disclosure controls and procedures as of December 31, 2005. Based on this evaluation, our Chief Executive Officer and Chief Financial Officer, solely for the reason below, concluded that our disclosure controls and procedures were not effective as of December 31, 2005 in alerting them in a timely manner to material information required to be included in our reports filed under the Exchange Act. This evaluation identified a material weakness in our disclosure controls and procedures with respect to analyzing debt and equity instruments to identify potential embedded derivatives and any required accounting entries and disclosures pertaining to embedded derivatives. Management is taking steps to implement appropriate corrective action in this regard. (b) Changes in internal controls There were no significant changes in the Company's internal controls over financial reporting or in other factors that could significantly affect these internal controls subsequent to the date of their most recent evaluation, including any corrective actions with regard to significant deficiencies and material weaknesses. ITEM 9B. OTHER INFORMATION -------- ----------------- None. 66 PART III -------- ITEM 10. DIRECTORS AND EXECUTIVE OFFICERS OF THE REGISTRANT. -------- --------------------------------------------------- EXECUTIVE OFFICERS AND DIRECTORS The names and ages of the executive officers and directors of the Company, and their positions with the Company as of March 31, 2006 are as follows: Name Age Position ----------------------------------------- ------------ ------------------------------------------------------ Dr. Shelby T. Brewer 69 Chairman of the Board and Chief Executive Officer ----------------------------------------- ------------ ------------------------------------------------------ O. Mack Jones 65 President & Chief Operating Officer ----------------------------------------- ------------ ------------------------------------------------------ James M. DeAngelis 45 Chief Financial and Administrative Officer, Treasurer ----------------------------------------- ------------ ------------------------------------------------------ Bentley J. Blum 64 Director ----------------------------------------- ------------ ------------------------------------------------------ Dr. Frank E. Coffman 64 Director ----------------------------------------- ------------ ------------------------------------------------------ Paul E. Hannesson 65 Director ----------------------------------------- ------------ ------------------------------------------------------ VADM Michael P. Kalleres 65 Director ----------------------------------------- ------------ ------------------------------------------------------ Robert A. Maczewski 58 Director ----------------------------------------- ------------ ------------------------------------------------------ Ambassador William A. Wilson 90 Director ----------------------------------------- ------------ ------------------------------------------------------ DR. SHELBY T. BREWER, 69, Director since January 2001 o Chairman and CEO of the Company since April 2003. o President of the Company from January 2001 to April 2003. o Since April 2000, Mr. Brewer served as Chairman and CEO of Solutions, a wholly owned subsidiary of the Company. o From 1996 to March 2000, Dr. Brewer was President of S. Brewer Enterprises, a privately held consulting firm he founded that is engaged in supporting mergers and acquisitions, arranging private and public financing, and forming joint ventures abroad. o Served as President and CEO of the nuclear power businesses of ABB Combustion Engineering, a public company, from 1985 to 1995. o From 1981 to 1984, he served as Assistant Secretary of Energy in the Reagan administration, holding the top nuclear post in the US government. o Dr. Brewer holds Ph.D. and M.S. degrees in nuclear engineering from Massachusetts Institute of Technology; he holds a B.S. degree in mechanical engineering and a B.A. in humanities from Columbia University. 67 BENTLEY J. BLUM, 64, Director since March 1996 o Served as director of Environmental since 1984, Chairman of the Board of Environmental, a public company, from 1984 to November 1996 and is its principal stockholder. o Currently serves as a director of Separation, a wholly owned subsidiary of Environmental. Currently serves as a director of Solution, a wholly owned subsidiary of the Company. o Sole stockholder and director of a number of corporations that hold real estate interests, oil drilling and other corporate interests that are privately held companies. o Mr. Blum is the brother-in-law of Paul E. Hannesson, a director of the Company. DR. FRANK E. COFFMAN 64, Director since June 2002 o Mr. Coffman also currently serves as Senior Vice President, of Metcalf & Eddy, a public company, involved in construction and engineering (August 1997 - Present). o Mr. Coffman served as Senior Vice President, Government & Commercial Programs, IT Corporation, a public company, from January 1995 to May 1997 and as Vice President, Government & Commercial Programs, IT Corporation from 1984 to 1995. o Mr. Coffman served as Deputy Assistant Secretary for Waste Management for the Department of Energy ("DOE") from 1981 to 1984, Director of the Office of Advanced Nuclear Systems, DOE from 1980 to 1981 and as a Director of the Division of Fusion Development and Technology, DOE from 1978 to 1980. o Mr. Coffman served as Chief of the Energy Research Development Agency, Fusion Systems and Applications Studies Branch from 1970 to 1975. o Mr. Coffman serves on the Board of Directors of Holmes and Narver, a public company. o Mr. Coffman holds a Ph.D. in nuclear physics and a MA degree in plasma physics from Vanderbilt University. Mr. Coffman holds a BS degree in physics from Western Kentucky University. JAMES M. DEANGELIS, 45, Director since June 2002 o Mr. DeAngelis was appointed Vice President-Finance and Treasurer of the Company in 1998 and promoted to Chief Financial and Administrative Officer and Secretary in December 1998. o Mr. DeAngelis also served as Senior Vice President-Sales & Marketing of Separation, a public company, since July 1996. o He also served as the President of CFC Technologies, formerly a wholly owned subsidiary of the Company, since September 1994. o He holds a MBA from the American Graduate School of International Management. He holds B.S. degrees in Biology and Physiology from the University of Connecticut. 68 PAUL E. HANNESSON, 65, Director since March 1996 o Mr. Hannesson served as Chairman, CEO and President of the Company from 1996 to January 2001. o He served as Director and Officer of Environmental, a public company, from 1996 to July 1998. o He serve4 as Chairman of the Board and CEO of Separation, a wholly owned subsidiary of the Company from May 1997 to December 2004. o Mr. Hannesson is the brother-in-law of Bentley Blum, a director of the Company. O. MACK JONES, 65, Director since October 2003 o President and C.O.O. of the Company since April 2003. o Since February 2001, Mr. Jones served as Acting President of Advanced Sciences, a wholly owned subsidiary of the Company. o From April 1998 to February 2001, Mr. Jones also has served as Vice President of Field Operations of the Company since April 1998, managing its field treatability studies and commercial projects. o From June 1996 to April 1998, Mr. Jones served as a consultant to the Company assisting in the commercialization of the solvated electron technology. o From 1991 to February 1998, Mr. Jones served as the founder and principal executive officer of a privately held environmental consulting company, Florida Vector Services, which provided both consulting and hands-on remediation services primarily in TSCA-related areas. o From 1986 to 1991, Mr. Jones was Vice President-Operations with Quadrex Environmental Company, a public company, managing the company's field remediation businesses. o Mr. Jones held several managerial operating positions in power generation and distribution arenas during his twenty-six years of service to General Electric Company, a public company. o Mr. Jones holds a degree in mechanical engineering from Mississippi State University and is registered as a professional mechanical engineer. VADM MICHAEL P. KALLERES, 65, Director since June 2002 o VADM Kalleres currently serves as President of Dare to Excel Inc., a privately held financial management and consulting firm (1998 to present). He also served as President and Chief Executive Officer of Global Associates, Ltd., Technology Services Group, a privately held financial and corporate consulting firm, from 1994 to 1998. o VADM Kalleres retired from active duty in September 1994 after 32 years as a naval officer. o VADM Kalleres was awarded 18 personal/unit military/combat decorations including the Defense Distinguished Service Medal (2 awards) and the U.S. Navy Distinguished Service Medal. He is also a recipient of the Congressional, Ellis Island Medal of Honor. 69 o VADM Kalleres is a former member (1994-1998) of the Defense Science Board, the Naval Studies Board of the National Academy of Science. He is also a board member of the Dean's Advisory Council at the Krannert School of Management-Purdue University, and the National Board of the Salvation Army. o VADM Admiral Kalleres was awarded a BS degree in Industrial Management and Engineering from the Krannert School of Management-Purdue University, and a MS degree in Political and International Affairs from George Washington University. ROBERT A. MACZEWSKI, 58, Director since February 2006 o Mr. Maczewski currently serves as a Sarbanes-Oxley Section 404 Independent Contractor to Weever and Tidwell, CPA, SOAProjects, Inc. and Kforce, Inc. for a variety of publicly traded companies (May 2004 to present). o Mr. Maczewski served as Chief Financial Officer for Republic Resources, Inc., a public company, from July 2003 to July 2004. o Mr. Maczewski served as President of Neptune Communications, a private company engaged in the design and installation of telecommunications cabling systems, from March 2001 to June 2003. o Mr. Maczewski served as a marketing executive of Riviera Finance, a private company marketing asset based lending products, from June 1997 to March 2001. o Mr. Maczewski served as Vice President of Commercial Capital Holding Corp., a private company engaged in factoring receivables for a variety of industries, from January 1995 to June 1997. o Mr. Maczewski served as President and Partner of Inter-American Funding Corp., a private company engaged in providing receivable insurance and factoring receivables through Export-Import Bank and American Credit Indemnity, from December 1989 to December 1995. o Mr. Maczewski served as President and Partner of Inter-American Holding Corp., a private company engaged in providing investor groups pre-acquisition analysis of assets acquired by Resolution Trust Corp., from December 1989 to December 1995. o Mr. Maczewski served as Senior Vice President of Louisiana Guaranty National Bank, a de-novo commercial bank, and was responsible for its formation, charter application and operation, from March 1985 to December 1989. o Mr. Maczewski served as Senior Vice President and Chief Financial Officer of First National Bank, a public company, from September 1982 to March 1985. o Mr. Maczewski served as a Banking Officer of First National Bank of Commerce, a public company, from February 1979 to September 1982. o Mr. Maczewski served as the Assistant Treasurer of The Chase Manhattan Bank, a public company, from January 1970 to January 1979. o Mr. Maczewski was awarded a BBA degree in Accounting from the College of The City of New York. AMBASSADOR WILLIAM A. WILSON, 90, Director since June 2002 o Mr. Wilson has been active in ranching and farming in California and Mexico from 1980 to 1997. o Mr. Wilson was active in real estate development in California from 1961 through 1985. 70 o Mr. Wilson served as Chief Engineer of Wilson Oil Tools, a privately held company, from 1938 through 1955 and as Chairman from 1955 to 1961. o Mr. Wilson served as the Presidential Envoy to the Holy See from 1980 to 1984 and as Ambassador to the Holy See from 1984 to 1986. o Mr. Wilson served on the Board of Directors of Jorgensen Steel Co., a public company, from 1973 to 1984 and again from 1986 to 1991. Mr. Wilson also served on the Board of Directors of Pennzoil Company, a public company, from 1983 to 1987. o Mr. Wilson holds a BA in Mechanical Engineering from Stanford University and a Doctor of Laws, Honoris Causa from Assumption College, Barry University, and Pepperdine University. Each director is elected to serve for a term of one year or until his or her successor is duly elected and qualified. The Company's officers are elected by, and serve at the pleasure of, the Board of Directors, subject to the terms of any employment agreements. Messrs. Hannesson and Blum are brothers-in-law. No family relationship exists among any other directors or executive officers of the Company. KEY EMPLOYEES The names and ages of the key employees of the Company not listed above, and their positions with the Company as of March 31, 2006, are as follows: Name Age Position ---- --- -------- Walter L. Foutz 52 Vice President of Operations, Advanced Sciences Mr. Foutz was appointed Vice President of Operations of Advanced Sciences in April 2005. Previously, Mr. Foutz served as Advanced Sciences' Western Regional Manager from January of 2002. Previously, Mr. Foutz has been a Sr. Project Manager with corporate and management responsibilities for Advanced Sciences from December 2000 to January 2002. From 1991 to 2000 Mr. Foutz was the Environmental Program Manager for MDM Services Corporation, managing environmental task-order contracts with numerous government clients. From 1986-1991 Mr. Foutz was the lead Senior Environmental Geologist on RFI/CMS and RI/FS projects at Dyess Air Force Base, Texas; Fallon Naval Air Station, Nevada;' Kansas City DOE Plant, Arizona Air National Guard Base, Tucson; US Army Kwajelein Atoll, Marshall Islands. Mr. Foutz received his B.S. in Geology in 1981. He has 24 years of progressive professional experience in geological, hydro-geological, and environmental consulting and contract management as a Department of Energy contractor. BOARD COMMITTEES The Company's Board of Directors has (i) an Audit Committee and (ii) a Compensation, Stock Option and Benefits Committee. The Company no longer maintains an Executive and Finance Committee (the "Finance Committee"). On August 30, 2000, the Board of Directors unanimously voted to abolish the Finance Committee and determined that the entire Board of Directors would perform its function. 71 As of December 31, 2005, the Compensation, Stock Option and Benefits Committee, was composed of Dr. Frank E. Coffman, as Chairman, Michael P. Kalleres, Ambassador William A. Wilson and Dr. Shelby T. Brewer. The Compensation, Stock Option, and Benefits Committee has responsibility for establishing and reviewing employee and consultant/advisor compensation, bonuses and incentive compensation awards, administering and interpreting the Company's 1998 Stock Option Plan, as amended (the "1998 Plan"), and determining the recipients, amounts and other terms (subject to the requirements of the 1998 Plan) of options which may be granted under the 1998 Plan and outside the 1998 Plan, from time to time and providing guidance to management in connection with establishing additional benefit plans. As of December 31, 2005, the Audit Committee was composed of Michael P. Kalleres as Chairman, Dr. Frank E. Coffman, Ambassador William A. Wilson and James M. DeAngelis. The responsibilities of the Audit Committee include selecting, engaging and determining the compensation of the firm of independent accountants to be retained by the Company, reviewing with the Company's independent accountants the scope and results of their audits, reviewing with the independent accountants and management the Company's accounting and reporting principles, policies and practices, as well as the Company's accounting, financial and operating controls and staff, supervising the Company's policies relating to business conduct and dealing with conflicts of interest relating to officers and directors of the Company. AUDIT COMMITTEE AND FINANCIAL EXPERT Michael P. Kalleres currently serves as the Chairman of the Audit Committee and the Board of Directors has determined him to be an audit committee financial expert for the Company. Mr. DeAngelis qualifies as an audit committee financial expert but is not independent of management. COMPENSATION OF DIRECTORS The Company pays non-management directors a director's fee in the amount of $375 per meeting for attendance at the meetings of the Board of Directors, and the Company reimburses the directors for actual expenses incurred in respect of such attendance. The Company does not separately compensate employees for serving as directors. COMPLIANCE WITH SECTION 16(a) OF THE EXCHANGE ACT Section 16(a) of the Exchange Act requires the Company's directors and executive officers, and persons who own more than 10% of the outstanding shares of the Company's common stock, to file initial reports of beneficial ownership and reports of changes in beneficial ownership of shares of common stock with the Commission. Such persons are required by regulations promulgated under the Exchange Act to furnish the Company with copies of all Section 16(a) forms filed with the Commission. Based on representations from the officers and directors, the Company believes that no director, executive officer or holder of more than 10% of the outstanding shares of common stock failed to file on a timely basis the reports required by Section 16(a) of the Exchange Act during, or with respect to, the year ended December 31, 2005. 72 CODE OF ETHICS The Company's board of directors has established and adopted a code of ethics in 2004 applicable to its senior executives, financial officers and directors. See Exhibit 14.01 - "Code of Ethics of Commodore Applied Technologies, Inc." 73 ITEM 11. EXECUTIVE COMPENSATION. -------- ----------------------- SUMMARY COMPENSATION The following table sets forth the amount of all compensation paid by the Company and/or its affiliates and allocated to the Company's operations for services rendered during each of 2005, 2004 and 2003 to all persons serving as the Company's Chief Executive Officer during 2005, 2004, and 2003 to each of the Company's four most highly compensated executive officers other than the Chief Executive Officer whose total salary and bonus compensation exceeded $100,000 during any such year. Summary Compensation Table ------------------------------------------------ Long-Term Compensation Annual Compensation Other Securities -------------------------------- Annual Restricted Under- All Other Compen- Stock Lying LTIP Compen- Name and Principal Salary Bonus sation Award(s) Options Pay-outs sation Position Year ($) ($) ($) ($) (#) ($) ($) -------------------------------- -------- ------------------- ------------------------ ----------------- -------- ----------- (a) (b) (c) (d) (e) (g) (g) (h) (i) Dr. Shelby T. Brewer (1) 2005 245,769(2) -0- -0- -0- -0-(3) -0- -0-(4) Chief Executive Officer 2004 13,274(2) -0- -0- -0- -0-(3) -0- 30,000(4) CXIA 2003 5,250(2) -0- -0- -0- 1,972,542(3) -0- 30,000(4) O. Mack Jones(5) 2005 222,769(6) -0- -0- -0- -0-(7) -0- -0- President & Chief 2004 132,000(6) -0- -0- -0- -0-(7) -0- -0- Operating Officer 2003 103,938(6) -0- -0- -0- 512,031(7) -0- -0- CXIA James M. DeAngelis(8) 2005 203,065(9) -0- -0- -0- -0-(10) -0- -0- Senior Vice President & Chief 2004 103,938(9) -0- -0- -0- -0-(10) -0- -0- Financial Officer 2003 12,480(9) -0- -0- -0- 1,032,091(10) -0- -0- CXIA Walter Foutz(11) 2005 114,166(12) -0- -0- -0- -0- -0- -0- Vice President of Operations 2004 97,880(12) -0- -0- -0- -0- -0- -0- CASI 2003 97,880(12) -0- -0- -0- -0- -0- -0- (1) Mr. Brewer served as Chief Executive Officer and President of Solutions and a director of the Company since April 2000. Mr. Brewer assumed the positions of Chairman, Chief Executive Officer and President of the Company from January 2001 through October 2003 and continues to serves as Chief Executive Officer and a director since October 2003 to present. (2) Represents the amount of Mr. Brewer's base salary paid by the Company. Mr. Brewer's base salary for 2005 was $285,000, of which $39,231 was originally deferred until December 31, 2005, and remains unpaid as of April 15, 2006. Mr. Brewer's base salary for 2004 was $285,000, of which $271,726 was originally deferred until December 31, 2004, and remains unpaid as of April 15, 2006. Mr. Brewer's base salary for 2003 from January through April was $250,000, and from May through December was $285,000 of which $271,000 was originally deferred until December 31, 2003, and remains unpaid as of April 15, 2006. Mr. Brewer's base salary for 2002 was $250,000 of which $190,385 was originally deferred until December 31, 2002, and remains unpaid as of April 15, 2006. Mr. Brewer's base salary for 2001was $250,000 of which $144,615 annually originally deferred until December 31, 2001, and remains unpaid as of April 15, 2006. Mr. Brewer's base salary for 2000 was $90,000. 74 (3) Represents shares of common stock underlying stock options granted to Mr. Brewer by the Company in his capacity as an officer and director of the Company. Mr. Brewer canceled prior options for 42,000 shares of common stock voluntarily on October 2, 2002. All amounts adjusted for the 1 for 20 reverse split of the Company's common stock on August 29, 2005. (4) Represents a $1,000,000 Life Insurance Policy in the name of Dr. Shelby T. Brewer paid on behalf of Mr. Brewer by the Company. Mr. Brewer's family was the beneficiary of the Life Insurance Policy. (5) Mr. Jones served as Vice President and Field Operations Manager of Solutions from April 1998 to January 2001 and as President of Advanced Sciences from February 2001 to present, and President and Chief Operating Officer of the Company from April 2003 to present. Mr. Jones has served as a director of the Company since October 2003. (6) Represents the amount of Mr. Jones' base salary paid by the Company. Mr. Jones' total base salary for 2005 was $250,000 of which $27,231 originally deferred until December 31, 2005, and remains unpaid as of April 15, 2006. Mr. Jones' total base salary for 2004 was $250,000 of which $118,000 originally deferred until December 31, 2004, and remains unpaid as of April 15, 2006. Mr. Jones' total base salary for 2003 from January through April was $165,000, and from May through December was $250,000 of which $115,485 originally deferred until December 31, 2003, and remains unpaid as of April 15, 2006. Mr. Jones' total base salary for 2002 was $165,000 of which $44,268 originally deferred until December 31, 2002, and remains unpaid as of April 15, 2006. Mr. Jones' total base salary for 2001 was $165,000 of which $30,461 originally deferred until December 31, 2001, and remains unpaid as of April 15, 2006. Mr. Jones' base salary for 2000 and 1999 was $150,000. (7) Represents shares of common stock underlying stock options granted to Mr. Jones the Company in his capacity as an officer of the Company. Mr. Jones canceled prior options for 21,875 shares of common stock voluntarily on October 2, 2002. All amounts adjusted for the 1 for 20 reverse split of the Company's common stock on August 29, 2005. (8) Mr. DeAngelis served as Vice President and Treasurer of the Company from July 1998 to December 1999 and as Sr. Vice President, Chief Financial and Administrative Officer, Treasurer and Secretary from December 1999 to present. Mr. DeAngelis has served as a director of the Company since June 2002. (9) Represents the amount of Mr. DeAngelis' base salary paid by the Company. Mr. DeAngelis' total base salary for 2005 was $225,000 of which $21,935 was originally deferred until December 31, 2004, and remains unpaid as of April 15, 2006. Mr. DeAngelis' total base salary for 2004 was $225,000 of which $121,062 was originally deferred until December 31, 2004, and remains unpaid as of April 15, 2006. Mr. DeAngelis' total base salary for 2003 from January through April was $165,000, and from May through December was $225,000 of which $194,520 was originally deferred until December 31, 2003, and remains unpaid as of April 15, 2006. Mr. DeAngelis' total base salary for 2002 was $165,000 of which $42,659 was originally deferred until December 31, 2002, and remains unpaid as of March 31, 2006. Mr. DeAngelis' total base salary for 2001 was $165,000 of which $30,461 was originally deferred until December 31, 2001, and remains unpaid as of April 15, 2006. Mr. DeAngelis' base salary for 2000 and 1999 was $165,000 and $145,000 respectively. (10) Represents shares of common stock underlying stock options granted to Mr. DeAngelis by the Company in his capacity as an officer of the Company. Mr. DeAngelis canceled prior options for 84,063 shares of common stock voluntarily on October 2, 2002. All amounts adjusted for the 1 for 20 reverse split of the Company's common stock on August 29, 2005. (11) Mr. Walter L. Foutz served as a Sr. Project Manager with corporate and management responsibilities for Advanced Sciences from December 2000 to January 2002. Mr. Foutz served as the Western Regional Manager of Advanced Sciences from January 2002 to March 2005. Mr. Foutz serves as Vice President of Operations of Advanced Sciences, Inc. since April 2005 to present. (12) Represents the amount of Mr. Foutz's base salary paid by the Company. Mr. Foutz's total base salary for 2005 from April January through February was $97,880, from March through April was $100,000, and from May through December was $118,000. Mr. Foutz's total base salary for 2004 was $97,880. Mr. Foutz's total base salary for 2003 was $97,880. 75 STOCK OPTIONS No options were granted during the year ended December 31, 2005 to any individuals listed in the Summary Compensation Table pursuant to the Company's 1998 Stock Option Plan, as amended, (the "1998 Plan") and no options were granted to any individuals outside of the 1998 Plan. The Company has no outstanding stock appreciation rights and granted no stock appreciation rights during the year ended December 31, 2005. The following table sets forth certain information concerning the exercise of options and the value of unexercised options held under the 1998 Plan and outside of the 1998 Plan at December 31, 2005 by the individuals listed in the Summary Compensation Table. Aggregated Option Exercises In Last Fiscal Year and Fiscal Year-End Option Values Number of Securities Underlying Value of Unexercised Unexercised Options In-the-Money Options Shares Value at Fiscal Year-End(#) at Fiscal Year-End($) Acquired on Realized Exercisable/ Exercisable/ Name Exercise (#) ($)(1) Un-exercisable Un-exercisable(2) ----------------------------------- ------------------ --------------- ------------------------------ -------------------------- (a) (b) (c) (d) (e) Dr. Shelby T. Brewer............ -0- -0- 2,115,802 / 2,115,802 -0- / -0- James M. DeAngelis.............. -0- -0- 1,244,175 / 1,244,175 -0- / -0- O. Mack Jones................... -0- -0- 600,000 / 600,000 -0- / -0- (1) Represents the difference between the last reported sale price of the Common Stock on December 31, 2005 ($0.017), and the exercise prices of the options (ranging from $0.57 to $1.40) multiplied by the applicable number of options exercised. (2) Represents the difference between the exercise price and the closing price on December 31, 2005, multiplied by the applicable number of securities. 76 EMPLOYMENT AGREEMENTS The Company has no employment contracts. COMPENSATION COMMITTEE INTERLOCKS AND INSIDER PARTICIPATION The individuals who served as members of the Compensation, Stock Option and Benefits Committee (the "Compensation Committee") during the year ended December 31, 2005 were Dr. Frank E. Coffman (Chairman), VADM Michael P. Kalleres, Ambassador William A. Wilson and Dr. Shelby T. Brewer. REPORT OF THE COMPENSATION COMMITTEE ON EXECUTIVE COMPENSATION The Compensation Committee was established in November 1996 and is responsible for, among other things, establishing the compensation policies applicable to executive officers of the Company. The Compensation Committee was composed of Dr. Frank E. Coffman (Chairman), VADM Michael P. Kalleres, Ambassador William A. Wilson and Dr. Shelby T. Brewer at December 31, 2005, all of whom, with the exception of Dr. Shelby T. Brewer, were non-employee Directors of the Company. All decisions of the Compensation Committee relating to the compensation of the Company's executive officers are reviewed by, and are subject to the final approval of, the full Board of Directors of the Company. Set forth below is a report prepared by Mr. Coffman, Mr. Kalleres and Mr. Wilson in their capacities as members of the Compensation Committee at December 31, 2005, addressing the Company's compensation policies for 2005 as they affected the Company's executive officers. Overview and Philosophy The Company's executive compensation program is designed to be linked to corporate performance and returns to stockholders. Of particular importance to the Company is its ability to grow and enhance its competitiveness for the rest of the decade and beyond. Shorter-term performance, although scrutinized by the Compensation Committee, stands behind the issue of furthering the Company's strategic goals. To this end, the Company has developed an overall compensation strategy and specific compensation plans that tie a significant portion of executive compensation to the Company's success in meeting specified performance goals. The objectives of the Company's executive compensation program are to: o attract, motivate and retain the highest quality executives; o motivate them to achieve tactical and strategic objectives in a manner consistent with the Company's corporate values; and o link executive and stockholder interest through equity-based plans and provide a compensation package that recognizes individual contributions as well as overall business results. 77 o To achieve these objectives, the Company's executive compensation program is designed to: o focus participants on high priority goals to increase stockholder value; o encourage behavior that exemplifies the Company's values relating to customers, quality of performance, employees, integrity, teamwork and good citizenship; o assess performance based on results and pre-set goals that link the business activities of each individual to the goals of the Company; and o increase stock ownership to promote a proprietary interest in the success of the Company. Executive Officer Compensation Each year the Compensation Committee conducts a full review of the Company's executive compensation program. This review includes a comprehensive evaluation of the competitiveness of the Company's compensation program and a comparison of the Company's executive compensation to certain other public companies, which in the view of the Compensation Committee represent the Company's most direct competitors for executive talent. It is the Compensation Committee's policy to target overall compensation for executive officers of the Company taking into account the levels of compensation paid for such positions by such other public companies. A variety of other factors, however, including position and time in position, experience, and both Company performance and individual performance, will have an impact on individual compensation amounts. The key elements of the Company's executive compensation program in 2005 consisted of base salary, annual incentive compensation and long-term incentive compensation in the form of stock options. The Compensation Committee's policies with respect to each of these elements, including the basis for the compensation awarded to the Company's Chief Executive Officer, are discussed below. Base Salaries. Base salaries for executive officers are established by evaluating, on an annual basis, the performance of such individuals (which evaluation involves management's consideration of such factors as responsibilities of the positions held, contribution toward achievement of the Company's strategic plans, attainment of specific individual objectives and interpersonal managerial skills), and by reference to the marketplace for executive talent, including a comparison to base salaries for comparable positions at other similar public companies. In 2005, total compensation was paid to executives primarily based upon individual performance and the extent to which the business plans for their areas of responsibility were achieved or exceeded. On balance, performance goals were substantially met or exceeded and therefore compensation was paid accordingly. Mr. Brewer, the Chairman of the Board, and Chief Executive Officer of the Company received annual compensation based upon, among other things, individual performance and the extent to which the business plans for his areas of responsibility were achieved or exceeded. Mr. Brewer received a base salary at an annual rate of $285,000 in 2005, of which $39,231 annually was deferred until December 31, 2005, and remains unpaid as of March 31, 2006. 78 The members of the Compensation Committee establish the amount actually received by Mr. Brewer each year as base salary for services rendered to the Company and its affiliates. In establishing Mr. Brewer's base salary for 2005, the Compensation Committee took into account the salaries of chief executive officers at other similar public companies, future objectives and challenges, and Mr. Brewer's individual performance, contributions and leadership. The Compensation Committee reviewed in detail Mr. Brewer's achievement of his 2004 goals and his individual contributions to the Company and its affiliates. The Compensation Committee concluded that he had achieved his 2004 goals and had provided a leadership role in achieving the Company's and its affiliates' strategic priorities for 2004. The Compensation Committee also considered Mr. Brewer's decisive management of operational and strategic issues, his drive to reinforce a culture of innovation and his ability and dedication to enhance the long-term value of the Company and its affiliates for their respective stockholders. In making its salary decisions with respect to Mr. Brewer, the Compensation Committee exercised its discretion and judgment based on the above factors, and no specific formula was applied to determine the weight of each factor. Mr. Brewer's base salary was not increased in 2005 and remains $285,000 per year. Annual Incentive Bonus. Annual incentive bonuses for executive officers are intended to reflect the Compensation Committee's belief that a significant portion of the annual compensation of each executive officer should be contingent upon the performance of the Company. During 2005, no annual incentive bonuses were paid to the individuals named in the Summary Compensation Table. Stock Options. The Compensation Committee has the power to grant stock options under the 1998 Plan and outside of the 1998 Plan. With respect to executive officers, it has been the Compensation Committee's practice to grant, on an annual basis, stock options that vest at the rate of 20% upon grant and 20% in each calendar year thereafter for four years, and that are exercisable over a ten-year period at exercise prices per share set at the fair market value per share on the date of grant. Generally, the executives must be employed by the Company at the time the options vest in order to exercise the options and, upon announcement of a Change in Control (pursuant to and as defined in the 1998 Plan), such options become immediately exercisable. The Compensation Committee believes that stock option grants provide an incentive that focuses the executives' attention on managing the Company from the perspective of an owner with an equity stake in the business. The Company's stock options are tied to the future performance of the Company's stock and will provide value to the recipient only when the price of the Company's stock increases above the option grant price. A total of 0, 0, and 3,854,068 stock options were granted pursuant to the 1998 Plan and outside the 1998 Plan in 2005, 2004, and 2003 respectively. A total of 0, 0 and 1,972,542 of such options were granted to Mr. Brewer in 2005, 2004 and 2003 respectively, and 0, 0, and 1,881,526 of such options were granted (in the aggregate) to other individuals named in the Summary Compensation Table in 2005, 2004 and 2003 respectively. The number of stock options granted in 2005, 2004 and 2003 were determined by reference to the long-term compensation for comparable positions at other similar public companies and based upon an assessment of individual performance. 79 Impact of Section 162(m) of the Internal Revenue Code The Compensation Committee's policy is to structure compensation awards for executive officers that will be consistent with the requirements of Section 162(m) of the Internal Revenue Code of 1986, as amended (the "Code"). Section 162(m) limits the Company's tax deduction to $1.0 million per year for certain compensation paid in a given year to the Chief Executive Officer and the four highest compensated executives other than the Chief Executive Officer named in the Summary Compensation Table. According to the Code and corresponding regulations, compensation that is based on attainment of pre-established, objective performance goals and complies with certain other requirements will be excluded from the $1.0 million deduction limitation. The Company's policy is to structure compensation awards for covered executives that will be fully deductible where doing so will further the purposes of the Company's executive compensation program. However, the Compensation Committee also considers it important to retain flexibility to design compensation programs that recognize a full range of performance criteria important to the Company's success, even where compensation payable under such programs may not be fully deductible. The Company expects that all compensation payments in 2005 to the individuals listed in the Summary Compensation Table will be fully deductible by the Company. Conclusion The Compensation Committee believes that the quality of executive leadership significantly affects the long-term performance of the Company and that it is in the best interest of the stockholders to compensate fairly executive leadership for achievement meeting or exceeding the high standards set by the Compensation Committee, so long as there is a corresponding risk when performance falls short of such standards. A primary goal of the Compensation Committee is to relate compensation to corporate performance. Based on the Company's performance in 2005, the Compensation Committee believes that the Company's current executive compensation program meets such standards and has contributed, and will continue to contribute, to the Company's and its stockholders' long-term success. COMPENSATION, STOCK OPTION AND BENEFITS COMMITTEE Ambassador William A. Wilson (Chairman) Dr. Frank E. Coffman Paul E. Hannesson Michael P. Kalleres The Report of the Compensation Committee on Executive Compensation shall not be deemed incorporated by reference by any general statement incorporating by reference this Annual Report into any filing under the Securities Act, or under the Exchange Act, except to the extent that the Company specifically incorporates this information by reference, and shall not otherwise be deemed filed under such Acts. 80 ITEM 12. SECURITY OWNERSHIP OF CERTAIN BENEFICIAL OWNERS AND MANAGEMENT ------- -------------------------------------------------------------- EQUITY COMPENSATION PLAN INFORMATION The following table reflects the number of shares of our common stock that, as of December 31, 2005, were outstanding and available for issuance under compensation plans that have previously been approved by our stockholders as well as compensation plans that have not previously been approved by our stockholders. Remaining Available for Number of Securities to be Weighted-Average Future Issuance Under Issued Upon Exercise of Exercise Price of Equity Compensation Outstanding Options, Outstanding Options, Plans (Excluding Warrants and Rights Warrants and Rights ($) Securities Reflected in Column (a)) Plan Category (a) (b) (c) Equity Compensation Plans Approved by Security Holders 568,272 4.27 265,384 (1)(2).................. Equity Compensation Plans not Approved by Security 5,125,358 0.57 -0- Holders (3)(4) ............ Total.......................... 5,698,630 0.94 265,384 ------------------------------ -------------------------- ------------------------------------ 1. Consists of options issuable under the 1998 Stock Option Plan, as amended, as approved by the stockholders on September 12, 2003. 2. Consists of options issuable outside of the 1998 Stock Option Plan, as amended as approved by the stockholders on September 12, 2003. 3. Includes options to purchase a total of 3,757,568 shares issued to Mr. Brewer, Mr. DeAngelis, Mr. Jones, and Mr. Hannesson in November 2003 outside of the 1998 Stock Option Plan, as amended. 4. Includes warrant to purchase a total of 1,367,790 shares issued to Mr. Blum in November 2003. 81 The following is a brief description of the material features of the equity compensation plans not approved by our stockholders that are reflected in the chart above. On November 19, 2003, our Board of Directors approved the issuance of stock options outside of the Company's 1998 Stock Option Plan, as amended, and warrants for the Company's common stock to executive officers and directors of the Company. A total of 3,757,568 fully vested, non-qualified stock options were issued with an exercise price of $0.57 and an expiration date of December 14, 2008 (as described in footnote 3 above). A warrant for a total of 1,367,790 shares of the Company's common stock was issued to a director with an exercise price of $0.57 and an expiration date of November 18, 2008 (as described in footnote 4 above). The purpose of these options and warrant is to advance the interests of our stockholders by enhancing our ability to attract, retain and motivate persons who make important contributions to the Company by providing them with equity ownership opportunities that better align their interests with those of our stockholders. Ten Year Option Repricings The following table sets forth information regarding options held by the Commodore Named Executive Officers and Directors that were voluntarily surrendered by such persons, after which the Company issued new options to such persons at current fair market value. The Compensation Committee approved these transactions in order to restore the incentive value of such options. Number of Exercise Length of Securities Price of Original Underlying Market Price of Option at Option Term Options Stock at Time of Time of New At Date of Repriced or Repricing or Repricing or Exercise Repricing Date Amended (#) Amendment ($)(1) Amendment ($) Price($)(2) or Amendment ----- ----------- ----------------- ------------- ----------- ------------ Dr. Shelby T. Brewer 10/02/02 10,000 $0.57 $5.76 $0.57 12/14/08 10/02/02 25,000 $0.57 $20.00 $0.57 12/14/08 10/02/02 7,000 $0.57 $21.20 $0.57 12/14/08 James M. DeAngelis 10/02/02 9,063 $0.57 $8.75 $0.57 12/14/08 10/02/02 15,000 $0.57 $5.76 $0.57 12/14/08 10/02/02 10,000 $0.57 $13.78 $0.57 12/14/08 O. Mack Jones 10/02/02 9,375 $0.57 $8.75 $0.57 12/14/08 10/02/02 5,000 $0.57 $5.76 $0.57 12/14/08 10/02/02 7,500 $0.57 $13.78 $0.57 12/14/08 Paul E. Hannesson 10/02/02 7,375 $0.57 $8.75 $0.57 12/14/08 10/02/02 50,000 $0.57 $10.00 $0.57 12/14/08 Bentley J. Blum 10/02/02 3,500 $0.57 $8.75 $0.57 12/14/08 10/02/02 3,500 $0.57 $10.00 $0.57 12/14/08 _________________________ (1) Represents the closing price of our common stock on October 2, 2002 as reported by the AMEX Stock Market adjusted for the 1 for 20 reverse split of the Company's common stock on August 29, 2005 ($0.57). (2) In October 2002, Mr. Brewer, the Company's Chairman of the Board and Chief Executive Officer, voluntarily surrendered options to purchase 42,000 shares of our common stock, after which the Company issued to him options to purchase 43,260 shares of our common stock so long as Mr. Brewer continues to be an eligible participant under the 1998 Stock Option Plan, as amended. The exercise price of the new options is equal to 100% of the fair market value of our common stock on the date of grant of the new options, as determined by the last reported sales price of our common stock as reported by the AMEX Stock Market on the date we granted the new options. All amounts adjusted for the 1 for 20 reverse split of the Company's common stock on August 29, 2005. 82 (3) In October 2002, Mr. DeAngelis, the Company's Chief Financial and Administrative Officer, Treasurer and Secretary, voluntarily surrendered options to purchase 34,063 shares of our common stock, after which the Company issued to him options to purchase 35,084 shares of our common stock so long as Mr. DeAngelis continues to be an eligible participant under the 1998 Stock Option Plan, as amended. The exercise price of the new options is equal to 100% of the fair market value of our common stock on the date of grant of the new options, as determined by the last reported sales price of our common stock as reported by the AMEX Stock Market on the date we granted the new options. All amounts adjusted for the 1 for 20 reverse split of the Company's common stock on August 29, 2005. (4) In October 2002, Mr. Jones, the Company's President and Chief Operating Officer, voluntarily surrendered options to purchase 21,875 shares of our common stock, after which the Company issued to him options to purchase 22,969 shares of our common stock so long as Mr. Jones continues to be an eligible participant under the 1998 Stock Option Plan, as amended. The exercise price of the new options is equal to 100% of the fair market value of our common stock on the date of grant of the new options, as determined by the last reported sales price of our common stock as reported by the AMEX Stock Market on the date we granted the new options. All amounts adjusted for the 1 for 20 reverse split of the Company's common stock on August 29, 2005. (5) In October 2002, Mr. Hannesson, the Company's former Chairman of the Board and Chief Executive Officer, voluntarily surrendered options to purchase 57,375 shares of our common stock, after which the Company issued to him options to purchase 59,096 shares of our common stock so long as Mr. Hannesson continues to be an eligible participant under the 1998 Stock Option Plan, as amended. The exercise price of the new options is equal to 100% of the fair market value of our common stock on the date of grant of the new options, as determined by the last reported sales price of our common stock as reported by the AMEX Stock Market on the date we granted the new options. All amounts adjusted for the 1 for 20 reverse split of the Company's common stock on August 29, 2005. (6) In October 2002, Mr. Blum voluntarily surrendered options to purchase 7,000 shares of our common stock, after which the Company issued to him options to purchase 7,210 shares of our common stock so long as Mr. Blum continues to be an eligible participant under the 1998 Stock Option Plan, as amended. The exercise price of the new options is equal to 100% of the fair market value of our common stock on the date of grant of the new options, as determined by the last reported sales price of our common stock as reported by the AMEX Stock Market on the date we granted the new options. All amounts adjusted for the 1 for 20 reverse split of the Company's common stock on August 29, 2005. 83 SHAREHOLDER RETURN PERFORMANCE This graph compares our total stockholder returns, the Standard and Poor's 500 Composite Stock Index, the Standard and Poor's 1500 Composite Environmental Services and Facilities Stock Index, the Standard and Poor's 600 Composite Environmental Services and Facilities Stock Index, the Standard and Poor's 500 Composite Environmental Services and Facilities Stock Index, and the Standard and Poor's 400 Composite Environmental Services and Facilities Stock Index. The graph assumes $100 invested at the per share closing price of the common stock of Commodore Applied Technologies, Inc. on the American Stock Exchange, from January 1, 2003 through March 6, 2003, and then on the Over the Counter Bulletin Board from that point forward. [GRAPHIC OMITTED] Comparison of initial $100 investment in various indices versus the common stock of the Company. -------------------------------------------------------------------- ----------- 12/31/2002 12/31/2003 12/31/2004 12/30/2005 -------------------------------------------------------------------- ----------- CXIA 133.33 21.67 21.67 14.17 -------------------------------------------------------------------- ----------- S&P 500 103.32 126.38 137.75 141.88 -------------------------------------------------------------------- ----------- S&P 1500 Environmental Services & Facilities 102.60 127.09 129.73 134.86 -------------------------------------------------------------------- ----------- S&P 600 Environmental Services & Facilities 101.85 109.08 148.91 154.20 -------------------------------------------------------------------- ----------- S&P 500 Environmental Services & Facilities 103.22 130.72 123.06 123.24 -------------------------------------------------------------------- ----------- S&P 400 Environmental Services & Facilities 100.05 121.00 144.86 167.64 -------------------------------------------------------------------- ----------- 84 SECURITY OWNERSHIP OF CERTAIN BENEFICIAL OWNERS The following table sets forth certain information, as of April 15, 2006, with respect to the beneficial ownership of common stock by each person known to the Company to be the beneficial owner of more than 5% of the outstanding shares of common stock of the Company. Unless otherwise indicated, the owners have sole voting and investment power with respect to their respective shares. Number of Shares Percentage of Outstanding Name and Address of of Common Stock Shares of Common Stock Beneficial Owner Beneficially Owned(4) Beneficially Owned ------------------- --------------------- ------------------------ Dr. Shelby T. Brewer (1)........ 2,970,837(5) 29.52% Bentley J. Blum(2).............. 1,645,154(6) 17.65% James M. DeAngelis (2).......... 1,127,490(7) 12.43% O. Mack Jones (3)............... 600,000(8) 7.01% (1) The address of Dr. Shelby T. Brewer is 2151 Jamieson Street, Carlyle Towers, Suite 308, Alexandria, Virginia 22314. (2) The address of Commodore Environmental Services, Inc., Bentley J. Blum, Paul E. Hannesson, and James M. DeAngelis is 150 East 58th Street, Suite 3238, New York, New York 10155. (3) The address of O. Mack Jones is 507 Knight Street, Suite B, Richland, Washington 99352. (4) As used herein, the term beneficial ownership with respect to a security is defined by Rule 13d-3 under the Exchange Act as consisting of sole or shared voting power (including the power to vote or direct the disposition of) with respect to the security through any contract, arrangement, understanding, relationship or otherwise, including a right to acquire such power(s) during the next 60 days. Unless otherwise noted, beneficial ownership consists of sole ownership, voting and investment rights. (5) Consists of: (i) 172 shares of common stock (ii) 24,535 shares of our common stock representing the balance held of the common stock issued pursuant to the Restated Brewer Note, dated as of March 15, 2001, between the Company and SB Enterprises and a subsequent conversion notice for 50% of the outstanding principal dated as of April 9, 2001; (iii) 650,570 shares of our common stock representing the balance held of the common stock issued pursuant to the Restated Brewer Note, dated as of March 15, 2001, between the Company and SB Enterprises and a subsequent conversion notice for the remaining 50% of the outstanding principal dated as of March 14, 2003; (iv) 43,260 shares of the Company common stock underlying currently exercisable options granted to Mr. Brewer by the Company under the 1998 Plan; (v) 100,000 shares of the Company common stock underlying currently exercisable options granted to Mr. Brewer by the Company outside of the Company's 1998 Plan; and (vi) 1,972,542 shares of our common stock underlying currently exercisable stock options granted to Mr. Brewer by the Company outside of the Company's 1998 Plan. All amounts adjusted for the 1 for 20 reverse split of the Company's common stock on August 29, 2005. (6) Consists of: (i) 125,000 shares of our common stock issued to Bentley J. Blum in exchange for $125,000 of debt owed to Mr. Blum from the Company; (ii) 7,210 shares of the Company common stock underlying currently exercisable options granted to Mr. Blum by the Company under the Company's 1998 Plan; (iii) 1,367,790 shares of our common stock underlying a currently exercisable five year warrant at an exercise price of $0.57 per share granted to the Blum Asset Trust by the Company in connection with the Blum Loan and services provided by the Blum Asset Trust over the last five years; and (iv) Mr. Blum's indirect beneficial ownership of common stock based upon his beneficial ownership of 28,479,737 shares and his spouse's ownership of 2,000,000 shares of Environmental common 85 stock, representing together 37.74% of the outstanding shares of Environmental common stock at March 31, 2006, and 4,500,000 shares of Environmental common stock underlying currently exercisable stock options, representing together 41.02% of the outstanding shares of Environmental. Does not include 785,400 shares of Environmental common stock owned by Simone Blum, the mother of Mr. Blum. Mr. Blum disclaims any beneficial interest in the shares of Environmental common stock owned by his spouse and mother. All amounts adjusted for the 1 for 20 reverse split of the Company's common stock on August 29, 2005. (7) Consists of (i) 900 shares of common stock; (ii) 42,084 shares of common stock underlying currently exercisable stock options granted to Mr. James M. DeAngelis by the Company under the Company's 1998 Plan; (iii) 50,000 shares of common stock underlying currently exercisable stock options granted to Mr. DeAngelis by the Company outside of the Company's 1998 Plan; (iv) Mr. DeAngelis' indirect beneficial ownership of common stock based upon his ownership of 580,000 shares of Environmental; and (vi) 1,032,091 shares of our common stock underlying currently exercisable stock options granted to Mr. DeAngelis by the Company outside of the 1998 Plan. All amounts adjusted for the 1 for 20 reverse split of the Company's common stock on August 29, 2005. (8) Consists of (i) 87,969 shares of common stock underlying currently exercisable stock options granted to Mr. O. Mack Jones by the Company under the Company's 1998 Plan; and (ii) 512,031 shares of our common stock underlying currently exercisable stock options granted to Mr. Jones by the Company outside of the 1998 Plan. All amounts adjusted for the 1 for 20 reverse split of the Company's common stock on August 29, 2005. 86 SECURITY OWNERSHIP OF MANAGEMENT The following table sets forth certain information with respect to the beneficial ownership of common stock as of March 31, 2006 by (i) each person known to the Company to be the beneficial owner of more than 5% of the outstanding shares of common stock of the Company, (ii) each Director, (iii) each individual listed in the Summary Compensation Table herein, and (iv) all executive officers and Directors of the Company as a group, as reported by such persons. Unless otherwise indicated, the owners have sole voting and investment power with respect to their respective shares. Number of Shares Percentage of Outstanding Name and Address of of Common Stock Shares of Common Stock Beneficial Owner Beneficially Owned(4) Beneficially Owned -------------------- --------------------- --------------------------- Dr. Shelby T. Brewer (1)............ 2,970,837(5) 29.52% Bentley J. Blum(2).................. 1,645,154(6) 17.65% James M. DeAngelis (2).............. 1,127,490(7) 12.43% O. Mack Jones (3)................... 600,000(8) 7.01% Paul E. Hannesson (2) 322,578(9) 3.91% Dr. Frank E. Coffman, PhD (2)....... 22,500(10) * VADM Michael P. Kalleres (2)........ 22,500(11) * Ambassador William A. Wilson (2).... 22,500(12) * All executive officers and Directors 6,733,558 41.88% as a group (8 persons) * Percentage ownership is less than 1%. (1) The address of Dr. Shelby T. Brewer is 2151 Jamieson Street, Carlyle Towers, Suite 308, Alexandria, Virginia 22314. (2) The address of Bentley J. Blum, Paul E. Hannesson, James M. DeAngelis, Frank E. Coffman, Michael P. Kalleres, and William A. Wilson is 150 East 58th Street, Suite 3238, New York, New York 10155. (3) The address of O. Mack Jones is 507 Knight Street, Suite B, Richland, Washington 99352. (4) As used herein, the term beneficial ownership with respect to a security is defined by Rule 13d-3 under the Exchange Act as consisting of sole or shared voting power (including the power to vote or direct the disposition of) with respect to the security through any contract, arrangement, understanding, relationship or otherwise, including a right to acquire such power(s) during the next 60 days. Unless otherwise noted, beneficial ownership consists of sole ownership, voting and investment rights. 87 (5) Consists of: (i) 172 shares of common stock (ii) 24,535 shares of our common stock representing the balance held of the common stock issued pursuant to the Restated Brewer Note, dated as of March 15, 2001, between the Company and SB Enterprises and a subsequent conversion notice for 50% of the outstanding principal dated as of April 9, 2001; (iii) 650,570 shares of our common stock representing the balance held of the common stock issued pursuant to the Restated Brewer Note, dated as of March 15, 2001, between the Company and SB Enterprises and a subsequent conversion notice for the remaining 50% of the outstanding principal dated as of March 14, 2003; (iv) 43,260 shares of the Company common stock underlying currently exercisable options granted to Mr. Brewer by the Company under the 1998 Plan; (v) 100,000 shares of the Company common stock underlying currently exercisable options granted to Mr. Brewer by the Company outside of the Company's 1998 Plan; and (vi) 1,972,542 shares of our common stock underlying currently exercisable stock options granted to Mr. Brewer by the Company outside of the Company's 1998 Plan. All amounts adjusted for the 1 for 20 reverse split of the Company's common stock on August 29, 2005. (6) Consists of: (i) 125,000 shares of our common stock issued to Bentley J. Blum in exchange for $125,000 of debt owed to Mr. Blum from the Company; (ii) 7,210 shares of the Company common stock underlying currently exercisable options granted to Mr. Blum by the Company under the Company's 1998 Plan; (iii) 1,367,790 shares of our common stock underlying a currently exercisable five year warrant at an exercise price of $0.57 per share granted to the Blum Asset Trust by the Company in connection with the Blum Loan and services provided by the Blum Asset Trust over the last five years; and (iv) Mr. Blum's indirect beneficial ownership of common stock based upon his beneficial ownership of 28,479,737 shares and his spouse's ownership of 2,000,000 shares of Environmental common stock, representing together 37.74% of the outstanding shares of Environmental common stock at March 31, 2006, and 4,500,000 shares of Environmental common stock underlying currently exercisable stock options, representing together 41.02% of the outstanding shares of Environmental. Does not include 785,400 shares of Environmental common stock owned by Simone Blum, the mother of Mr. Blum. Mr. Blum disclaims any beneficial interest in the shares of Environmental common stock owned by his spouse and mother. All amounts adjusted for the 1 for 20 reverse split of the Company's common stock on August 29, 2005. (7) Consists of (i) 900 shares of common stock; (ii) 42,084 shares of common stock underlying currently exercisable stock options granted to Mr. James M. DeAngelis by the Company under the Company's 1998 Plan; (iii) 50,000 shares of common stock underlying currently exercisable stock options granted to Mr. DeAngelis by the Company outside of the Company's 1998 Plan; (iv) Mr. DeAngelis' indirect beneficial ownership of common stock based upon his ownership of 580,000 shares of Environmental; and (vi) 1,032,091 shares of our common stock underlying currently exercisable stock options granted to Mr. DeAngelis by the Company outside of the 1998 Plan. All amounts adjusted for the 1 for 20 reverse split of the Company's common stock on August 29, 2005. (8) Consists of (i) 87,969 shares of common stock underlying currently exercisable stock options granted to Mr. O. Mack Jones by the Company under the Company's 1998 Plan; and (ii) 512,031 shares of our common stock underlying currently exercisable stock options granted to Mr. Jones by the Company outside of the 1998 Plan. All amounts adjusted for the 1 for 20 reverse split of the Company's common stock on August 29, 2005. (9) Consists of: (i) 59,096 shares of common stock underlying currently exercisable stock options granted to Mr. Paul E. Hannesson by the Company under the 1998 Plan; (ii) 240,904 shares of our common stock underlying currently exercisable options granted to Mr. Hannesson by the Company outside of the Company's 1998 Plan; and (iii) Mr. Hannesson's indirect beneficial ownership of common stock based upon his ownership of an aggregate of (a) 2,650,000 shares of Environmental common stock owned by Suzanne Hannesson, the spouse of Mr. Hannesson, (b) 2,650,000 shares of Environmental common stock owned by the Hannesson Family Trust (Suzanne Hannesson and John D. Hannesson, trustees) for the benefit of Mr. Hannesson's spouse and (c) 500,000 shares of Environmental common stock in exchange for options to purchase 950,000 shares of Environmental common stock, issued to Hannesson Family Trust, representing together 7.18% of the outstanding shares of Environmental common stock as of March 31, 2006, and (d) currently exercisable options to purchase 525,705 shares of 88 Environmental common stock, representing together 7.78% of the outstanding shares of Environmental common stock. Does not include (i) 2,000 shares of the Company's common stock owned by each of Jon Paul and Krista Hannesson, the adult children of Mr. Hannesson; and (ii) 1,000,000 shares of Environmental common stock owned by each of Jon Paul and Krista Hannesson. Mr. Hannesson disclaims any beneficial interest in the shares of Environmental common stock owned by or for the benefit of his spouse and children. It also does not include 50,000 shares of common stock underlying stock options granted to Mr. Hannesson by the Company that are not currently exercisable. All amounts adjusted for the 1 for 20 reverse split of the Company's common stock on August 29, 2005. (10) Consists of 22,500 shares of common stock underlying currently exercisable stock options granted to Mr. Dr. Frank E. Coffman by the Company under the Company's 1998 Plan. (11) Consists of 22,500 shares of common stock underlying currently exercisable stock options granted to Mr. Michael P. Kalleres VADM by the Company under the Company's 1998 Plan. (12) Consists of 22,500 shares of common stock underlying currently exercisable stock options granted to Mr. Ambassador William A. Wilson by the Company under the Company's 1998 Plan. Messrs. Blum and Hannesson are brothers-in-law. Executive Officers and Key Employees ------------------------------------ The executive officers of the Company are Dr. Shelby T. Brewer, who serves as Chairman of the Board and Chief Executive Officer, O. Mack Jones, who serves as President and Chief Operating Officer, and James M. DeAngelis, who serves as Chief Financial and Administrative Officer and Secretary and Treasurer. 89 ITEM 13. CERTAIN RELATIONSHIPS AND RELATED TRANSACTIONS. -------- ---------------------------------------------- On October 2, 2002, Mr. Bentley Blum, a Director of the Company, had previously loaned the Company with $125,000 of cash installments over the period of one year (the "Blum Loan"). The Company elected to convert the Blum Loan to the Company's common stock using the conversion feature of the 5-day average closing price of the Company's common stock prior to October 2, 2002. On October 2, 2002, Blum issued a conversion notice for $125,000 of the outstanding principal of the Blum Loan into 125,000 shares. Mr. Blum continued to provide cash installments in the form of a loan to the Company through February 2004 (the "Blum Demand Note"). The Blum Demand Note bears interest at 9% per annum and is due on demand. The current principal balance of the Blum Demand Note is $312,032 as of December 31, 2005 and remains unpaid as of April 15, 2006. See "MD&A - Liquidity and Capital Resources." On November 19, 2003, the Company issued a warrant to purchase 1,367,790 shares of its common stock at an exercise price of $0.57 per share (the closing price of our common stock on the OTCBB on such date) to the Blum Asset Trust, a company controlled by Bentley Blum, a Director of the Company, in consideration for the loans made to the Company and the usage of office space and personnel of the Blum Asset Trust over the last five years. In November 2000, the Company completed $500,000 in financing in the form of a loan (the "Weiss Group Note") from a group of four investors. The Weiss Group Note bears interest at 12% per annum and was due and payable on February 12, 2001. All holders of the Weiss Group Note have granted payment extensions to the Company until January 15, 2005 in exchange for warrants for 125,000 shares of the Company's common stock at an exercise price of $0.57. The current principal balance of the Weiss Group Note is $252,397 as of December 31, 2005 and remains unpaid as of April 15, 2006. See "MD&A - Liquidity and Capital Resources." Effective February 14, 2004, the members of the Weiss Group Note voluntarily cancelled all issued warrants to purchase 75,000 shares at an exercise price of $1.00 per share of the Company's common stock in connection with the Weiss Group Note. Effective February 15, 2004, the Company issued warrants to purchase 125,000 shares of its common stock at an exercise price of $0.57 per share to all holders of the Weiss Group Note in consideration of the extension of the due date of such loans by such persons from May 31, 2002 to January 15, 2005. Services Agreement In September 1997, the Company, Environmental, Separation, Advanced Sciences, and certain other affiliates of the Company (the "Affiliated Parties") entered into a services agreement, dated as of September 1, 1997 (the "Services Agreement"), whereby the Company and the Affiliated Parties agreed to cooperate in sharing, where appropriate, costs related to accounting services, financial management, human resources and personnel management and administration, information systems, executive management, sales and marketing, research and development, engineering, technical assistance, patenting, and other areas of service as are appropriately and necessarily required in the operations of the Company and the Affiliated Parties (collectively, the "Services"). Pursuant to the Services Agreement, services provided by professional employees of the 90 Company and the Affiliated Parties to one another are charged on the basis of time actually worked as a percentage of salary (including cost of benefits) attributable to that professional. In addition, charges for rent, utilities, office services and other routine charges regularly incurred in the normal course of business are apportioned to the professionals working in the office on the basis of salary, and then charged to any party in respect of whom the professional devoted such time based upon time actually worked. Furthermore, charges from third parties, including, without limitation, consultants, attorneys and accountants, are levied against the party actually receiving the benefit of such services. Pursuant to the Services Agreement, the Company acts as the coordinator of billings and payments for Services on behalf of itself and the other Affiliated Parties. There was no sharing of services in 2001, 2002, 2003, 2004, and 2005 although, insurance costs were allocated between Affiliated Parties when it was beneficial to insure the family of companies under one policy. 91 ITEM 14. PRINCIPAL ACCOUNTANT FEES AND SERVICES -------- -------------------------------------- The following is a summary of the fees billed to the Company by its principal accountants during the years ended December 31, 2005 and December 31, 2004: ----------------------- ------------------- -------------------- 2005 2004 ----------------------- ------------------- -------------------- Audit Fees $83,000 $34,840 ----------------------- ------------------- -------------------- Audit Related Fees 4,600 3,200 ----------------------- ------------------- -------------------- Tax Fees 8,000 8,000 ----------------------- ------------------- -------------------- All Other Fees -0- -0- ----------------------- ------------------- -------------------- Total $95,600 $46,040 ----------------------- ------------------- -------------------- Fees for audit services include fees associated with the annual audit, the reviews of our quarterly reports on Form 10-Q, assistance with and review of documents filed with the SEC and comfort letters. Audit related fees consist of fees related to the edgarization and filing of SEC forms. Tax fees include tax compliance and tax consultations. The board of directors has adopted a policy that requires advance approval of all audit, audit-related, tax services, and other services performed by our independent registered public accountants. The policy provides for pre-approval by the board of directors of specifically defined audit and non-audit services. Unless the specific service has been previously pre-approved with respect to that year, the board of directors must approve the permitted service before the independent registered public accountants are engaged to perform it. Financial Information Systems Design and Implementation Fees There were no fees billed by Tanner LC. for services rendered in connection with financial information systems design and implementation services described in Paragraph (c)(4)(ii) of Rule 2-01 of Regulation S-X. during the fiscal year ended December 31, 2005. Principal Accountant Independence The Audit Committee has determined that the provision of all non-audit services performed by the principal accountant were compatible with maintaining their independence. 92 PART IV ------- ITEM 15. EXHIBITS, FINANCIAL STATEMENT SCHEDULES AND REPORTS ON FORM 8-K ------- --------------------------------------------------------------- The following documents are filed as part of this Annual Report: Page No. -------- Financial Statements. --------------------- Commodore Applied Technologies, Inc. Report of Independent Registered Public Accounting Firm....... F-1 Consolidated Balance Sheets as of December 31, 2005 and 2004... F-2 Consolidated Statements of Operations for the years ended December 31, 2005, 2004 and 2003........................ F-3 Consolidated Statements of Stockholders' Deficit for the years ended December 31, 2005, 2004 and 2003.................. F-4 Consolidated Statements of Cash Flows for the years ended December 31, 2005, 2004 and 2003.............................. F-6 Notes to Consolidated Financial Statements.................... F-9 All financial statement schedules for which provision is made in the applicable accounting regulations of the Securities and Exchange Commission are not required under the related instructions or are inapplicable, and, therefore, have been omitted. 93 Exhibits. --------- Exhibit No. Description ----------- ----------- 3.1 Certificate of Incorporation of the Company. (1) 3.2 By-Laws of the Company. (1) 4.1 Specimen common stock Certificate. (3) 4.11 Common Stock Purchase Agreements, dated as of September 26, 1997, by and between the Company and each of certain private investors listed therein. (9) 4.19 Warrant to purchase shares of common stock of Commodore Applied Technologies, Inc. issued to The Shaar Fund Ltd. (16) 4.20 Certificate of Designation of Series E Preferred Stock. (16) 4.21 Warrant to purchase shares of common stock of Commodore Applied Technologies, Inc. issued to Avalon Research Group, Inc. (16) 4.22 Warrant to purchase shares of common stock of Commodore Applied Technologies, Inc. issued to The Shaar Fund Ltd. (20) 4.22 Certificate of Designation of Series F Preferred Stock. (20) 4.23 Warrant to purchase shares of common stock of Commodore Applied Technologies, Inc. issued to Avalon Research Group, Inc. (20) 4.24 Certificate of Designation of Series H Preferred Stock. (24) 4.25 Certificate of Designation of Series I Preferred Stock. (26) *4.26 Certificate of Designation of Series J Preferred Stock. 10.15 Non-Competition, Non-Disclosure and Intellectual Property Agreement, dated March 29, 1996, between the Company and Gerry D. Getman. (1) 10.7 1996 Stock Option Plan of the Company. (1) 10.9 Nationwide Permit for PCB Disposal issued by the EPA to Commodore Remediation Technologies, Inc. (1) 10.17 License Agreement, dated as of March 29, 1996, by and between the Company and Environmental, relating to the use of SET in the CFC Business. (2) 10.32 Services Agreement, dated as of September 1, 1997, by and among the Company, Environmental, Separation, Advanced Sciences and other affiliated companies named therein. (14) 10.33 Amended and Restated 1996 Stock Option Plan. (13) 10.34 Securities Purchase Agreement, dated November 4, 1999, between Commodore Applied Technologies, Inc. and The Shaar Fund Ltd. (16) 10.35 Registration Rights Agreement, dated November 4, 1999, between Commodore Applied Technologies, Inc. and the Shaar Fund Ltd. (16) 94 10.37 Securities Purchase Agreement, dated March 15, 2000, between Commodore Applied Technologies, Inc. and The Shaar Fund Ltd. (16) 10.38 Registration Rights Agreement, dated March 15, 2000, between Commodore Applied Technologies, Inc. and the Shaar Fund Ltd. (16) 10.43 Specimen Form of Common Stock Certificate. (1) 10.50 Secured Promissory Note, dated November 13, 2000, issued to Klass Partners Ltd. in the principal amount of $250,000. (20) 10.51 Secured Promissory Note, dated November 13, 2000, issued to Mathers Associates in the principal amount of $150,000. (20) 10.52 Secured Promissory Note, dated November 13, 2000, issued to Jon Paul Hannesson in the principal amount of $75,000. (20) 10.53 Secured Promissory Note, dated November 13, 2000, issued to Stephen A. Weiss in the principal amount of $25,000. (20) 10.55 Securities Purchase Agreement, dated November 13, 2000, by and among Commodore Applied Technologies, Inc., Commodore Environmental Services, Inc., Mathers Associates, Klass Partners, Ltd., Jon Paul Hannesson and Stephen A. Weiss. (20) 10.56 Security Agreement, dated November 13, 2000 by and among Mathers Associates, Klass Partners, Ltd., Jon Paul Hannesson, Stephen A. Weiss and Commodore Applied Technologies, Inc. (20) 10.57 Registration Rights Agreement, dated November 13, 2000, among Mathers Associates, Klass Partners, Ltd., Jon Paul Hannesson, Stephen A. Weiss and Commodore Applied Technologies, Inc. (20) 10.58 Dispute Resolution Management, Inc. Undertaking Letter, dated November 13, 2000. (20) 10.59 Nationwide Permit Extension for PCB Disposal issued by the EPA to Commodore Remediation Technologies, Inc. (20) 10.71 Memorandum of Understanding for Amendment of $500,000 CXI Bridge Loan Documents, dated April 16, 2001, by and among the Company, Commodore Environmental Services, Inc., Mathers Associates, Jon Paul Hannesson and Stephen A. Weiss. (20) 10.72 Klass Partners Ltd. Agreement for Amendment of CXI Bridge Loan Documents, dated April 16, 2001, by the Company and Klass Partners, Ltd. (20) 10.73 Warrant to purchase 300,000 shares of common stock of the Company issued to Mathers Associates. (20) 10.74 Warrant to purchase 75,000 shares of common stock of the Company issued to Jon Paul Hannesson. (20) 10.75 Warrant to purchase 75,000 shares of common stock of the Company issued to Krista S. Hannesson. (20) 10.76 Warrant to purchase 50,000 shares of common stock of the Company issued to Stephen A. Weiss. (20) 95 10.77 Memorandum of Understanding for Amendment of $500,000 CXI Bridge Loan Documents, dated April 16, 2001, by and among the Company, Commodore Environmental Services, Inc., Mathers Associates, Klass Partners, Jon Paul Hannesson and Stephen A. Weiss. (23) 10.78 Warrant to purchase 222,222 shares of common stock of the Company issued to Klass Partners. (23) 10.79 Warrant to purchase 166,667 shares of common stock of the Company issued to Mathers Associates. (23) 10.80 Warrant to purchase 41,666 shares of common stock of the Company issued to Jon Paul Hannesson. (23) 10.81 Warrant to purchase 41,666 shares of common stock of the Company issued to Krista S. Hannesson. (23) 10.82 Warrant to purchase 27,778 shares of common stock of the Company issued to Stephen A. Weiss. (23) 10.84 Registration Rights Agreement dated May 22, 2001, between Commodore Applied Technologies, Inc., and Dr. Marion Danna. (23) 10.85 Warrant to purchase 500,000 shares of common stock of the Company issued to Dr. Marion Danna. (23) 10.89 Registration Rights Agreement dated June 13, 2001, between Commodore Applied Technologies, Inc., and the Shaar Fund, Ltd. (23) 10.91 Warrant to purchase 166,667 shares of common stock of the Company issued to the Shaar Fund, Ltd. (23) 10.102 Forbearance Agreement dated April 1, 2002, between Commodore Applied Technologies, Inc., and Milford Capital & Management. (24) 10.103 Memorandum of Understanding for Amendment of $500,000 CXI Bridge Loan Documents, dated April 29, 2002, by and among the Company, Commodore Environmental Services, Inc., Mathers Associates, Klass Partners, Jon Paul Hannesson and Stephen A. Weiss. (24) 10.108 Settlement Agreement dated August 19, 2002 by and among Commodore Applied Technologies, Inc., Dispute Resolution Management, Inc., William J. Russell and Tamie P. Speciale. (24) 10.109 Liability Release Agreement dated August 19, 2002 by Dispute Resolution Management, Inc., William J. Russell and Tamie P. Speciale to Commodore Applied Technologies, Inc. (24) 10.110 Liability Release Agreement dated August 19, 2002 by Commodore Applied Technologies, Inc. to Dispute Resolution Management, Inc., William J. Russell and Tamie P. Speciale. (24) 10.114 Memorandum of Understanding for Amendment of $500,000 CXI Bridge Loan Documents, dated November 18, 2002, by and among the Company, Commodore Environmental Services, Inc., Mathers Associates, Klass Partners, Jon Paul Hannesson and Stephen A. Weiss. (24) 96 10.127 Warrant to purchase 27,355,800 shares of common stock issued to Blum Asset Trust. (25) 10.130 Memorandum of Understanding for Amendment of $500,000 CXI Bridge Loan Documents, dated February 15, 2004, by and among the Company, Mathers Associates, Klass Partners, Jon Paul Hannesson and Stephen A. Weiss. (25) 10.131 Warrant to purchase 222,222 shares of common stock of the Company issued to Klass Partners. (25) 10.132 Warrant to purchase 166,667 shares of common stock of the Company issued to Mathers Associates. (25) 10.133 Warrant to purchase 41,667 shares of common stock of the Company issued to Jon Paul Hannesson. (25) 10.134 Warrant to purchase 41,667 shares of common stock of the Company issued to Krista S. Hannesson. (25) 10.135 Warrant to purchase 27,778 shares of common stock of the Company issued to Stephen A. Weiss. (25) 10.136 Warrant to purchase 500,000 shares of common stock of the Company issued to Klass Partners. (25) 10.137 Warrant to purchase 300,000 shares of common stock of the Company issued to Mathers Associates. (25) 10.138 Warrant to purchase 75,000 shares of common stock of the Company issued to Jon Paul Hannesson. (25) 10.139 Warrant to purchase 75,000 shares of common stock of the Company issued to Krista S. Hannesson. (25) 10.140 Warrant to purchase 50,000 shares of common stock of the Company issued to Stephen A. Weiss. (25) 10.141 Warrant to purchase 444,444 shares of common stock of the Company issued to Klass Partners. (25) 10.142 Warrant to purchase 333,334 shares of common stock of the Company issued to Mathers Associates. (25) 10.143 Warrant to purchase 83,332 shares of common stock of the Company issued to Jon Paul Hannesson. (25) 10.144 Warrant to purchase 83,332 shares of common stock of the Company issued to Krista S. Hannesson. (25) 10.145 Warrant to purchase 55,556 shares of common stock of the Company issued to Stephen A. Weiss. (25) 10.146 Series E Convertible Preferred automatic conversion date extension dated March 10, 2004, between the Company and The Shaar Fund, Ltd. (25) 10.147 Series F Convertible Preferred automatic conversion date extension dated April 9, 2004, between the Company and The Shaar Fund, Ltd. (25) 10.148 Dividend Forgiveness letter dated April 9, 2004, between the Company and The Shaar Fund, Ltd. (25) 97 10.149 Promissory Note dated April 12, 2005, between the Company and The Shaar Fund, Ltd. (26) 10.150 Amended and Restated Security Agreement dated April 12, 2005, between the Company and The Shaar Fund, Ltd. (26) 10.151 Patent Collateral Assignment dated April 12, 2005, between the Company and The Shaar Fund, Ltd. (26) 10.152 Amended and Restated Guaranty and Suretyship Agreement dated April 12, 2005, between the Company and The Shaar Fund, Ltd. (26) 10.153 Exchange Agreement dated April 12, 2005, between the Company and The Shaar Fund, Ltd. (26) *10.154 Warrant to purchase 4,000,000 shares of common stock of the Company issued to Dr. Marion Danna. *10.155 Securities Purchase Agreement dated April 27, 2005, between Commodore Applied Technologies, Inc., and Dr. Marion Danna. *10.156 Registration Rights Agreement dated April 27, 2005, between Commodore Applied Technologies, Inc., and Dr. Marion Danna. *10.157 Amended Promissory Note effective October 1, 2005, between the Company and The Shaar Fund, Ltd. *10.158 Amended Exchange Agreement effective October 1, 2005, between the Company and The Shaar Fund, Ltd. 14.01 Code of Ethics of Commodore Applied Technologies, Inc. (26) 16.1 Letter regarding change in certifying accountant. (12) 16.2 Letter regarding change in certifying accountant. (17) *22.1 Subsidiaries of the Company. *31.1 Certification Pursuant to Section 302 of the Sarbanes-Oxley Act of 2002. *31.2 Certification Pursuant to Section 302 of the Sarbanes-Oxley Act of 2002. *32.1 Certification Pursuant to 18 U.S.C. Section 1350, as Adopted Pursuant to Section 906 of the Sarbanes-Oxley Act of 2002. *32.2 Certification Pursuant to 18 U.S.C. Section 1350, as Adopted Pursuant to Section 906 of the Sarbanes-Oxley Act of 2002. 99.1 Debt Repayment Agreement, dated September 28, 1998, between the Company and Environmental. (15) 99.2 Registration Rights Agreement, dated September 28, 1998, between the Company and Environmental. (15) * Filed herewith. (1) Incorporated by reference and filed as Exhibit to Registrant's Registration Statement on Form S-1 filed with the Securities and Exchange Commission on May 2, 1996 (File No. 333-4396). (2) Incorporated by reference and filed as Exhibit to Registrant's Amendment No. 1 to Registration Statement on Form S-1 filed with the Securities and Exchange Commission on June 11, 1996 (File No. 333-4396). (3) Incorporated by reference and filed as Exhibit to Registrant's Amendment No. 2 to Registration Amendment No.2 to Registration Statement on Form S-1 filed with the Securities and Exchange Commission on June 25, 1996 (File No. 333-4396). 98 (4) Incorporated by reference and filed as Exhibit to Registrant's Post-Effective Amendment No. 1 to Registration Statement on Form S-1 filed with the Securities and Exchange Commission on July 1, 1996 (File No. 333-4396). (5) Incorporated by reference and filed as Exhibit to Registrant's Current Report on Form 8-K filed with the Securities and Exchange Commission on October 15, 1996 (File No. 1-11871). (6) Incorporated by reference and filed as Exhibit to Registrant's Current Report on Form 8-K filed with the Securities and Exchange Commission on January 27, 1997 (File No. 1-11871). (7) Incorporated by reference and filed as Exhibit to Amendment No. 3 to Registration Statement on Form S-1 of Separation filed with the Securities and Exchange Commission on January 23, 1997 (File No. 333-11813). (8) Incorporated by reference and filed as Exhibit to Annual Report on Form 10-K for the fiscal year ended December 31, 1996 of Environmental filed with the Securities and Exchange Commission on April 15, 1997 (File No. 0-10054). (9) Incorporated by reference and filed as an Exhibit to Registrant's Current Report on Form 8-K filed with the Securities and Exchange Commission on October 3, 1997 (File No. 1-11871). (10) Incorporated by reference and filed as an Exhibit to Registrant's Current Report on Form 8-K filed with the Securities and Exchange Commission on February 23, 1998 (File No. 1-11871). (11) Incorporated by reference and filed as an Exhibit to Registrant's Annual Report on Form 10-K for the fiscal year ended December 31, 1996 filed with the Securities and Exchange Commission on April 15, 1997 (File No. 1-11871). (12) Incorporated by reference and filed as an Exhibit to Registrant's Current Report on Form 8-K filed with the Securities and Exchange Commission on December 24, 1996 (File No. 1-11871). (13) Incorporated by reference and filed as an Exhibit to the Registrant's Registration Statement on Form S-8 filed with the Securities and Exchange Commission on December 5, 1997 (File No. 333-41643). (14) Incorporated by reference and filed as an Exhibit to Registrant's Annual Report on Form 10-K for the fiscal year ended December 31, 1997 filed with the Securities and Exchange Commission on March 31, 1998 (File No. 1-11871). (15) Incorporated by reference and filed as an Exhibit to Registrant's Current Report on Form 8-K filed with the Securities and Exchange Commission on January 5, 1999 (File No. 1-11871). (16) Incorporated by reference and filed as an Exhibit to Registrant's Current Report on Form 8-K filed with the Securities and Exchange Commission on January 5, 1999 (File No. 1-11871). (17) Incorporated by reference and filed as Exhibit to Amendment No. 5 to Registrant's Registration Statement on Form S-3 filed with the Securities and Exchange Commission on September 12, 1999 (File No. 333-95445). (18) Incorporated by reference and filed as an Exhibit to Registrant's Current Report on Form 8-K filed with the Securities and Exchange Commission on August 23, 1999 (File No. 1-11871). (19) Incorporated by reference and filed as an Exhibit to Registrant's Current Report on Form 8-K filed with the Securities and Exchange Commission on September 13, 2000 (File No. 1-11871). 99 (20) Incorporated by reference and filed as an Exhibit to Registrant's Annual Report on Form 10-K/A for the fiscal year ended December 31, 2000 filed with the Securities and Exchange Commission on May 04, 2001 (File No. 1-11871). (21) Incorporated by reference and filed as an Exhibit to Registrant's Current Report on Form 8-K filed with the Securities and Exchange Commission on September 26, 2001 (File No. 1-11871). (22) Incorporated by reference and filed as an Exhibit to Registrant's Current Report on Form 8-K filed with the Securities and Exchange Commission on October 31, 2001 (File No. 1-11871). (23) Incorporated by reference and filed as an Exhibit to Registrant's Annual Report on Form 10-K for the fiscal year ended December 31, 2001 filed with the Securities and Exchange Commission on April 15, 2002 (File No. 1-11871). (24) Incorporated by reference and filed as an Exhibit to Registrant's Annual Report on Form 10-K for the fiscal year ended December 31, 2002 filed with the Securities and Exchange Commission on April 15, 2003 (File No. 1-11871). (25) Incorporated by reference and filed as an Exhibit to Registrant's Annual Report on Form 10-K for the fiscal year ended December 31, 2003 filed with the Securities and Exchange Commission on April 15, 2004 (File No. 1-11871). (26) Incorporated by reference and filed as an Exhibit to Registrant's Annual Report on Form 10-K for the fiscal year ended December 31, 2004 filed with the Securities and Exchange Commission on April 15, 2005 (File No. 1-11871). Reports on Form 8-K: ------------------- 1. The Company filed a Current Report on Form 8-K, dated April 19, 2005, regarding a press release issued by the Company announcing its 2004 year end earnings. 2. The Company filed a Current Report on Form 8-K, dated March 16, 2005, regarding a press release issued by the Company announcing the Company's subsidiary, CASI, progress on the eDAM contract in Oak Ridge, TN, CASI was awarded a one year contract from WESKEM of Oak Ridge to support their sampling efforts with the Waste Disposition Services Project, and the protest of the award of the FFTF contract is ongoing. 3. The Company filed a Current Report on Form 8-K, dated May 15, 2005, announcing its March 31, 2005 Quarterly earnings. 100 4. The Company filed a Current Report on Form 8-K, dated July 27, 2005, announcing it entered into a stock purchase agreement (the "Agreement") and a warrant agreement (the "Warrant") with a private investor, Dr. Marion Danna (the "Investor") on April 27, 2005. The closing of the transactions contemplated by the Agreement took place on July 10, 2005. Under the terms of the Agreement the Investor purchased, for a purchase price of $100,000.00, 10,000,000 shares of the Company's common stock bearing a restrictive legend and a warrant for 4,000,000 shares of the Company's common stock with an exercise price of $0.01, exercisable immediately with a three year life. 5. The Company filed a Current Report on Form 8-K, dated August 23, 2005, announcing its June 30, 2005 Quarterly earnings. The Company also announced that the ongoing months of execution of the EDAM contract at Oak Ridge, TN by its wholly owned subsidiary Commodore Advanced Sciences, Inc. (CASI) have been successful, and that the Company plans to market these services at other DOE sites. 6. The Company filed a Current Report on Form 8-K, dated August 31, 2005, announcing that the previously approved reverse stock split with the established a ratio of 1-for 20 became effective at the close of business on August 29, 2005. Applied common stock will begin trading on a reverse-split basis on August 30, 2005. As a result of the reverse stock split, every 20 shares of Applied's common stock will be combined into one share of Applied common stock. As a result of the reverse stock split, the issued and outstanding shares of Applied's common stock will be reduced from approximately 156 million shares to approximately 7.8 million shares. The number of authorized shares will not be reduced. The reverse stock split affects all shares of common stock, stock options and warrants of Applied outstanding as of immediately prior to the effective time of the reverse stock split. Fractional shares of common stock of the Company will not be issued as a result of the reverse stock split, but instead, holders of pre-split shares of common stock who otherwise would have been entitled to receive a fractional share as a result of the reverse split will receive one whole share. Shares of Applied common stock will trade on the Nasdaq Over the Counter Bulletin Board Market under the symbol CXIA after the reverse split goes into effect on August 30, 2005. The Company also announced that Bechtel Jacobs has recently doubled its two year [2005 & 2006] valuation of the EDAM contract with Commodore/SAIC, from about $7 Million to about $14 million. The contract calls for a duration of two years with an option to extend another two years. 101 7. The Company filed a Current Report on Form 8-K, dated November 22, 2005, announcing its September 30, 2005 Quarterly earnings. The Company also announced that that it recognized an accrual accounting issue that our independent auditors brought to its attention within the last two weeks. After further research and discussion with the Company's independent auditors, the Company determined that the embedded conversion features associated with the New Shaar Convertible Note and the Series I Convertible Preferred Stock issued April 12, 2005, qualified as derivatives in accordance with EITF 00-19 and SFAS No. 133, thus requiring liability recognition and marking the derivative to its fair value as of each reporting date (each quarter). The Company further stated that its management has taken immediate steps to accurately record and disclose this liability and is in the process of eliminating the liability from the Company in the future. 8. The Company filed a Current Report on Form 8-K, dated November 23, 2005, announcing its restated June 30, 2005 Quarterly earnings. The restatement arose from the Company's determination that it had not accounted for the embedded conversion option of the Convertible Secured Note and the Series I Convertible Preferred Stock entered into on April 12, 2005 as embedded derivatives. The Company has determined that the fair value of the embedded derivatives should be recorded as a liability, with any changes in the fair value of the embedded derivatives between reporting dates as a derivative loss or gain, as appropriate. The Company has also shown the effects of the reverse stock split effective August 29, 2005, and has also shown separately the effect of dividends accrued to preferred stockholders on loss per share, due to the reduced number of common shares outstanding. Subsequent to the reverse stock split, the effect of dividends accrued to preferred stockholders affected loss per share. 9. The Company filed a Current Report on Form 8-K, dated December 14, 2005, regarding a press release announcing that that Advanced Sciences received special recognition from Bechtel Jacobs for compiling a multi-year safety record for on job performance without an accident or work loss safety related incident on the environmental sampling and data management contract (EDAM). 10. The Company filed a Current Report on Form 8-K, dated February 8, 2006, regarding a press release announcing that Chairman and CEO, Shelby T. Brewer, issued the Company's 2006 Chairman's Letter to address the current and future business opportunities for the Company. 102 SIGNATURES Pursuant to the requirements to Section 13 or 15(d) of the Securities Exchange Act of 1934, the registrant has duly caused this report to be signed on its behalf by the undersigned, thereunto duly authorized. Date: April 17, 2006 COMMODORE APPLIED TECHNOLOGIES, INC. By:/s/ James M. DeAngelis ---------------------- James M. DeAngelis, Senior Vice President and Chief Financial Officer Pursuant to the requirements of the Securities Exchange Act of 1934, this report has been signed below by the following persons on behalf of the registrant and in the capacities and on the dates indicated. /s/ Shelby T. Brewer Chairman of the Board April 17, 2006 -------------------- and Chief Executive Officer Dr. Shelby T. Brewer (principal executive officer) /s/ James M. DeAngelis Senior Vice President and April 17, 2006 ---------------------- Chief Financial Officer James M. DeAngelis (principal financial officer) /s/ Bentley J. Blum Director April 17, 2006 ------------------- Bentley J. Blum /s/ Frank E. Coffman Director April 17, 2006 -------------------- Dr. Frank E. Coffman Paul E. Hannesson Director April 17, 2006 ----------------- Paul E. Hannesson /s/ O. Mack Jones Director April 17, 2006 ----------------- O. Mack Jones /s/ Michael P. Kalleres Director April 17, 2006 ----------------------- VADM Michael P. Kalleres /s/ Robert A. Maczewski Director April 17, 2006 ----------------------- Robert A. Maczewski /s/ William A. Wilson Director April 17, 2006 --------------------- Ambassador William A. Wilson 103 SUPPLEMENTAL INFORMATION TO BE FURNISHED WITH REPORTS FILED PURSUANT TO SECTION 15(d) OF THE ACT BY REGISTRANTS WHICH HAVE NOT REGISTERED SECURITIES PURSUANT TO SECTION 12 OF THE ACT The Company sent to its security holders an annual report and proxy material during the 2005 fiscal year. 104 COMMODORE APPLIED TECHNOLOGIES, INC. AND SUBSIDIARIES Consolidated Financial Statements December 31, 2005 and 2004 COMMODORE APPLIED TECHNOLOGIES, INC. AND SUBSIDIARIES Index -------------------------------------------------------------------------------- Page ---- Commodore Applied Technologies, Inc. Report of Independent Registered Public Accounting Firm F-1 Consolidated Balance Sheets as of December 31, 2005 and 2004 F-2 Consolidated Statements of Operations for the years ended December 31, 2005, 2004 and 2003 F-3 Consolidated Statements of Stockholders' Deficit for the years ended December 31, 2005, 2004 and 2003 F-4 Consolidated Statements of Cash Flows for the years ended December 31, 2005, 2004 and 2003 F-6 Notes to Consolidated Financial Statements F-9 REPORT OF INDEPENDENT REGISTERED PUBLIC ACCOUNTING FIRM To the Board of Directors and Stockholders of Commodore Applied Technologies, Inc. and subsidiaries We have audited the consolidated balance sheets of Commodore Applied Technologies, Inc. and subsidiaries (the Company) as of December 31, 2005 and 2004, and the related consolidated statements of operations, stockholders' deficit and cash flows for the years ended December 31, 2005, 2004, and 2003. These consolidated financial statements are the responsibility of the Company's management. Our responsibility is to express an opinion on these consolidated financial statements based on our audits. We conducted our audits in accordance with the standards of the Public Company Accounting Oversight Board (United States). Those standards require that we plan and perform the audits to obtain reasonable assurance about whether the financial statements are free of material misstatement. An audit includes examining, on a test basis, evidence supporting the amounts and disclosures in the financial statements. An audit also includes assessing the accounting principles used and significant estimates made by management, as well as evaluating the overall financial statement presentation. We believe that our audits provide a reasonable basis for our opinion. In our opinion, the consolidated financial statements referred to above present fairly, in all material respects, the financial position of Commodore Applied Technologies, Inc. and subsidiaries as of December 31, 2005 and 2004, and the results of their operations and their cash flows for the years ended December 31, 2005, 2004, and 2003, in conformity with U.S. generally accepted accounting principles. The accompanying consolidated financial statements have been prepared assuming that the Company will continue as a going concern. As discussed in Note 2 to the consolidated financial statements, the Company has a working capital deficit and has suffered recurring losses. These factors that raise substantial doubt about the Company's ability to continue as a going concern. Management's plans regarding those matters are also described in Note 2. The consolidated financial statements do not include any adjustments that might result from the outcome of this uncertainty. /s/ Tanner LC Salt Lake City, Utah April 6, 2006 F-1 COMMODORE APPLIED TECHNOLOGIES, INC. AND SUBSIDIARIES Consolidated Balance Sheets December 31, 2005 and 2004 (Amounts in thousands except shares) -------------------------------------------------------------------------------- 2005 2004 ------------------------ Assets ------ Current assets: Cash and cash equivalents $ 65 $ 15 Accounts receivable, net 2,065 259 Prepaid assets and other current assets 139 - ------------------------ Total current assets 2,269 274 Property and equipment, net 148 95 ------------------------ Total assets $ 2,417 $ 369 ------------------------ Liabilities and Stockholders' Deficit ------------------------------------- Current liabilities: Accounts payable $ 1,376 $ 791 Related party payable 253 253 Line of credit 141 - Notes payable 635 512 Other accrued liabilities 4,450 5,107 ------------------------ Total current liabilities 6,855 6,663 Long-term debt, net of current portion 5,426 3,034 ------------------------ Total liabilities 12,281 9,697 ------------------------ Commitments and contingencies Stockholders' deficit: Convertible Preferred Stock, Series H and J, par value $.001 per share, aggregate liquidation value of $6,353 and $3,677 at December 31, 2005 and 2004, respectively, 3% cumulative dividends for Series H, 10% cumulative dividends for Series J, 1,550,000 shares authorized, 1,188,302 shares and 1,001,200 shares issued and outstanding at December 31, 2005 and 2004, respectively 1 1 Common Stock, par value $.001 per share, 300,000,000 shares authorized, 7,948,217 shares and 6,717,304 shares issued and outstanding at December 31, 2005 and 2004, respectively 8 7 Additional paid-in capital 69,680 67,503 Accumulated deficit (79,290) (76,576) ------------------------ (9,601) (9,065) Treasury stock, 171,875 shares (263) (263) ------------------------ Total stockholders' deficit (9,864) (9,328) ------------------------ Total liabilities and stockholders' deficit $ 2,417 $ 369 ------------------------ -------------------------------------------------------------------------------- The accompanying notes are an integral part of the consolidated financial statements. F-2 COMMODORE APPLIED TECHNOLOGIES, INC. AND SUBSIDIARIES Consolidated Statements of Operations December 31, 2005 and 2004 (Amounts in thousands except shares) -------------------------------------------------------------------------------------------- 2005 2004 2003 ----------------------------------------- Revenues $ 10,275 $ 738 $ 660 Costs and expenses: Cost of revenues 9,132 919 811 Research and development 5 9 70 General and administrative 2,072 1,674 1,700 Depreciation and amortization 54 136 267 ----------------------------------------- Total costs and expenses 11,263 2,738 2,848 ----------------------------------------- Loss from operations (988) (2,000) (2,188) Other income (expense): Derivative loss (543) - - Interest expense (1,183) (404) (769) ----------------------------------------- Loss before income taxes (2,714) (2,404) (2,957) Income tax benefit - - - ----------------------------------------- Net loss (2,714) (2,404) (2,957) Deemed dividends and dividends accrued to preferred stockholders (4,067) (291) (374) ----------------------------------------- Net loss applicable to common shareholders $ (6,781) $ (2,695) $ (3,331) ----------------------------------------- Net loss per share - basic and diluted $ (0.93) $ (0.43) $ (0.72) Number of weighted average shares outstanding - basic and diluted 7,309 6,334 4,602 ----------------------------------------- -------------------------------------------------------------------------------------------- The accompanying notes are an integral part of the consolidated financial statements. F-3 COMMODORE APPLIED TECHNOLOGIES, INC. AND SUBSIDIARIES Consolidated Statements of Stockholders' Deficit Years Ended December 31, 2005, 2004, and 2003 (Amounts in thousands except shares) ------------------------------------------------------------------------------------------------------------------------- Preferred Stock Common Stock Additional ---------------------------------------- Paid-In Accumulated Treasury Shares Amount Shares Amount Capital Deficit Stock Total ------------------------------------------------------------------------------------- Balance, January 1, 2003 1,213,700 $ 1 2,951,354 $ 3 $ 67,185 $ (71,215) $ (263) $ (4,289) Conversion of series E and F preferred stock into common stock (180,000) - 2,168,333 2 (2) - - - Issuance of common stock as payment of preferred stock dividends - - 105,928 - 182 - - 182 Conversion of debt to common stock - - 659,492 1 283 - - 284 Issuance of warrants for: Payment of accounts payable - - - - 3 - - 3 Services - - - - 198 - - 198 Extension of debt - - - - 301 - - 301 Preferred stock dividends - - - - (374) - - (374) Net loss - - - - - (2,957) - (2,957) ------------------------------------------------------------------------------------ Balance, December 31, 2003 1,033,700 1 5,885,108 6 67,776 (74,172) (263) (6,652) Conversion of series E preferred stock into common stock (32,500) - 807,196 1 (1) - - - Exercise of warrants - - 25,000 - 19 - - 19 Preferred stock dividends - - - - (291) - - (291) Net loss - - - - - (2,404) - (2,404) ------------------------------------------------------------------------------------ Balance, December 31, 2004 1,001,200 1 6,717,304 7 67,503 (76,576) (263) (9,328) ------------------------------------------------------------------------------------------------------------------------- The accompanying notes are an integral part of the consolidated financial statements. F-4 COMMODORE APPLIED TECHNOLOGIES, INC. AND SUBSIDIARIES Consolidated Statements of Stockholders' Deficit Continued ------------------------------------------------------------------------------------------------------------------------- Preferred Stock Common Stock Additional ---------------------------------------- Paid-In Accumulated Treasury Shares Amount Shares Amount Capital Deficit Stock Total ------------------------------------------------------------------------------------- Conversion of series E and I preferred stock into common stock (12,500) - 730,913 1 (1) - - - Conversion of accrued dividends into series I preferred stock 199,602 - - - 1,400 - - 1,400 Preferred stock dividends - - - - (365) - - (365) Sale of common stock for cash - - 500,000 - 100 - - 100 Deemed dividend from embedded derivative - - - - (3,702) - - (3,702) Reclassification of embedded derivative from liabilities to equity - - - - 4,745 - - 4,745 Net loss - - - - - (2,714) - (2,714) ------------------------------------------------------------------------------------ Balance, December 31, 2005 1,188,302 $ 1 7,948,217 $ 8 $ 69,680 $ (79,290) $ (263) $ (9,864) ------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------- The accompanying notes are an integral part of the consolidated financial statements. F-5 COMMODORE APPLIED TECHNOLOGIES, INC. AND SUBSIDIARIES Consolidated Statements of Cash Flows Years Ended December 31, 2005, 2004, and 2003 (Amounts in thousands, except shares and per share data) ---------------------------------------------------------------------------------------------------------- 2005 2004 2003 ------------------------------------------- Cash flows from operating activities: Net loss $ (2,714) $ (2,404) $ (2,957) Adjustments to reconcile net loss to net cash used in operating activities: Depreciation and amortization 54 136 267 Amortization of debt discount 500 31 35 Derivative loss 543 - - Issuance of warrants for services - - 198 Issuance of warrants for extension of debt - - 301 Changes in assets and liabilities: Accounts receivable, net (1,806) (188) 25 Prepaid assets (10) 13 150 Checks written in excess of cash - (13) 13 Accounts payable and accrued liabilities 2,096 893 1,013 -------------------------------------------- Net cash used in operating activities (1,337) (1,532) (955) Cash flows from investing activities: Equipment purchased or constructed (107) (61) - Advances from (repayments to) related parties, net - (25) 198 Patents acquired - - (11) -------------------------------------------- Net cash (used in) provided by investing activities (107) (86) 187 Cash flows from financing activities: (Repayments)/borrowings under line of credit 141 (64) 64 Borrowings on debt and warrants 1,259 1,678 776 Payments on long-term debt and notes payable (6) - (131) Proceeds from the sale of common stock 100 - - Proceeds from exercise of warrants - 19 - -------------------------------------------- Net cash provided by financing activities 1,494 1,633 709 -------------------------------------------- Net change in cash and cash equivalents 50 15 (59) Cash and cash equivalents at beginning of year 15 - 59 -------------------------------------------- Cash and cash equivalents at end of year $ 65 $ 15 $ - -------------------------------------------- ---------------------------------------------------------------------------------------------------------- The accompanying notes are an integral part of the consolidated financial statements. F-6 COMMODORE APPLIED TECHNOLOGIES, INC. AND SUBSIDIARIES Consolidated Statements of Cash Flows Continued -------------------------------------------------------------------------------- Supplemental disclosure of cash flow information: Cash paid during the year for: Interest $ 32 $ 55 $ 10 --------------------------------- Income taxes $ - $ - $ - --------------------------------- Non-Cash Investing and Financing Activities: 2005 ---- o The Company recorded $365 of unpaid dividends to holders of preferred stock. o The Company recorded an embedded derivative liability of $8,063 at its inception on April 12, 2005, $3,702 of which was recorded as a deemed dividend to preferred stockholders, and $4,361 was recorded as a debt discount. The Company reclassified the embedded derivative liability to equity on October 1, 2005. The embedded derivative liability was $8,606 and the remaining debt discount was $3,861 at time of reclassification, which resulted in an increase to equity of $4,745. o On April 12, 2005, the Company entered into an exchange agreement with The Shaar Fund, LTD (the "Shaar Exchange Agreement"). Under terms of the Shaar Exchange Agreement, the Company agreed that Shaar will exchange all of its right, title and interest in and to the remaining outstanding shares of the Series E and Series F Preferred Stock (including all other accrued and unpaid dividends thereon of $1,400) for 395,302 shares of the Company's Series I Convertible Preferred Stock. The Shaar note was also amended, in which $833 of accrued interest and fees were added to the principal balance of the note. o Effective October 1, 2005, the Company entered into an exchange agreement with The Shaar Fund, LTD (the "Shaar Exchange Agreement"). Under terms of the Shaar Exchange Agreement, the Company agreed that Shaar will exchange all of its right, title and interest in and to 388,302 shares of the Series I Preferred Stock (not including all other accrued and unpaid dividends thereon) for 388,302 shares of the Company's Series J Convertible Preferred Stock. The Shaar note was also amended effective October 1, 2005, in which the conversion feature was amended to include a minimum and maximum conversion rate. -------------------------------------------------------------------------------- The accompanying notes are an integral part of the consolidated financial statements. F-7 COMMODORE APPLIED TECHNOLOGIES, INC. AND SUBSIDIARIES Consolidated Statement of Cash Flows Continued -------------------------------------------------------------------------------- o On August 29, 2005, the Company effected the previously approved 1-for-20 reverse common stock split. As a result of the reverse stock split, the issued and outstanding shares of the Company's common stock were reduced from approximately 156 million shares to approximately 7.8 million shares. The reverse stock split, including the effect on loss per share, has been presented retroactively as if it had occurred on January 1, 2003. 2004 ---- o The Company recorded $291 of unpaid dividends to holders of preferred stock. o The Company purchased equipment in the amount of $8 with a note payable. 2003 ---- o The Company recorded $374 of unpaid dividends to holders of preferred stock, and paid $182 of the unpaid dividends by issuance of 105,928 shares of common stock. o The Company converted debt of $250 and accrued interest of $34 by issuance of 659,492 shares of common stock. o The Company issued 50,000 warrants valued at $3 as payment of accounts payable. o The Company issued to a member of the board of directors 1,367,790 warrants valued at $470 for forbearance of debt ($272) and services ($198). o The Company issued 50,000 new warrants and re-priced and extended 75,000 warrants to forbear payments on and extend notes payable, resulting in a debt discount of $30. -------------------------------------------------------------------------------- The accompanying notes are an integral part of the consolidated financial statements. F-8 COMMODORE APPLIED TECHNOLOGIES, INC. AND SUBSIDIARIES Notes to Consolidated Financial Statements December 31, 2005 and 2004 (In thousands except share and per share data) -------------------------------------------------------------------------------- 1. Summary of Background Significant Commodore Applied Technologies, Inc. and subsidiaries Accounting ("Applied" or "the Company"), is engaged in the Policies destruction and neutralization of hazardous waste from other materials. Applied owns technologies related to the separation and destruction of polychlorinated biphenyls (PCBs) and chlorofluorocarbons (CFCs). Applied is currently working on the commercialization of these technologies through development efforts, licensing arrangements and joint ventures. Through Commodore Advanced Sciences, Inc. ("CASI"), formerly Advanced Sciences, Inc., a subsidiary acquired on October 1, 1996, Applied has contracts with various government agencies and private companies in the United States and abroad. Principles of Consolidation The consolidated financial statements include the accounts of Applied and its majority-owned subsidiaries. All significant intercompany balances and transactions have been eliminated. -------------------------------------------------------------------------------- F-9 COMMODORE APPLIED TECHNOLOGIES, INC. AND SUBSIDIARIES Notes to Consolidated Financial Statements Continued -------------------------------------------------------------------------------- 1. Summary of Cash and Cash Equivalents Significant Applied considers cash and highly liquid debt Accounting instruments with original maturities of three months or Policies less at the date of purchase to be cash equivalents. Continued Concentration of Credit Risk and Significant Customers Applied maintains its cash in bank deposit accounts which, at times, may exceed federally insured limits. Applied has not experienced any losses in such accounts. With respect to trade receivables, Applied generally does not require collateral as the majority of Applied's services are performed for the U.S. Government and prime contractors that serve the U.S. Government. Applied believes it is not exposed to any significant credit risk on cash, cash equivalents and trade receivables. Sales to major customers which exceeded 10 percent of revenues are as follows: Years Ended December 31, ---------- --------- ---------- 2005 2004 2003 ---------- --------- ---------- Customer A $ 9,350 $ 188 $ - Customer B $ 229 $ 260 $ 97 Customer C $ 126 $ 128 $ 133 Customer D $ - $ 14 $ 160 Customer A accounts for 95% of the accounts receivable balance as of December 31, 2005. Risk and Uncertainty Applied's operations involving the separation and destruction of Polychlorinated Biphenyls (PCBs) requires a permit from the Environmental Protection Agency EPA. Applied had a valid nationwide permit related to the treatment of PCBs in certain substances. The permit expired September 15, 2001. Applied is currently in the process of applying for a renewal of the permit. Until the permit is reviewed and allowed, Applied, or its client, must post a closure bond specific to the amount of any contracts that utilize Applied's destruction technology related to the treatment of PCB's. -------------------------------------------------------------------------------- F-10 COMMODORE APPLIED TECHNOLOGIES, INC. AND SUBSIDIARIES Notes to Consolidated Financial Statements Continued -------------------------------------------------------------------------------- 1. Summary of Accounts receivable Significant Trade receivables are carried at original invoice amount Accounting less an estimate made for doubtful receivables based on Policies a review of all outstanding amounts on a monthly basis. Continued Management determines the allowance for doubtful accounts by identifying troubled accounts and by using historical experience applied to an aging of accounts. Trade receivables are written off when deemed uncollectible. Recoveries of trade receivables previously written off are recorded when received. A trade receivable is considered to be past due if any portion of the receivable balance is outstanding for more than 90 days. Interest is not charged on trade receivables. Property and Equipment Property and equipment are recorded at cost, less accumulated depreciation. Improvements which substantially increase the useful lives of assets are capitalized. Maintenance and repairs are expensed as incurred. Upon retirement or disposal, the related cost and accumulated depreciation are removed from the respective accounts and any gain or loss is recorded in the Statement of Operations. Depreciation is computed on the straight-line method based on the estimated useful lives of the assets which range from 3 to 5 years. Intangible Assets Patents and completed technology represents certain technology and related patents acquired in connection with the purchase of third-party interests in Commodore Laboratories, Inc. ("Labs"). Patents and completed technology were fully amortized as of December 31, 2005 and 2004. Impairment of Long-Lived Assets Applied reviews its long-lived assets for impairment whenever events or changes in circumstances indicate that the carrying amount of the assets may not be recoverable. The Company evaluates, at each balance sheet date, whether events and circumstances have occurred which indicate possible impairment. The carrying value of a long-lived asset is considered impaired when the estimated cumulative undiscounted cash flows of the related asset or asset group is less than the carrying value. In that event, a loss is recognized based on the amount by which the carrying value exceeds the estimated fair market value of the long-lived asset. -------------------------------------------------------------------------------- F-11 COMMODORE APPLIED TECHNOLOGIES, INC. AND SUBSIDIARIES Notes to Consolidated Financial Statements Continued -------------------------------------------------------------------------------- 1. Summary of Revenue Recognition Significant Substantially all of Applied's revenues are generated by Accounting its subsidiary, CASI. CASI's revenues consist of Policies engineering and scientific services performed for the Continued U.S. Government and prime contractors that serve the U.S. Government under a variety of contracts, most of which provide for unit prices. Revenue under unit price contracts is recorded when a contract or arrangement exists, the fees to be charged are fixed or determinable, the services have been provided, and collection of the billed amount is reasonably assured. Most of the Company's historical contracts provided for reimbursement of costs plus fixed fees. Direct and indirect contract costs incurred in reimbursement plus cost contracts are subject to audit by the Defense Contract Audit Agency ("DCAA"). Management does not expect these audits to materially affect the financial statements and has established appropriate allowances to cover potential audit disallowances. Contract revenues have been recorded in amounts which are expected to be realized upon final settlement. The DCAA has audited the Company's contracts through 1999. An allowance for potential disallowances is recorded as a reduction in revenue based upon the portion of billed and unbilled receivables that management believes may be disallowed upon audit by the DCAA. Research and Development Research and development expenditures are charged to operations as incurred. Income Taxes Income taxes are determined in accordance with Statement of Financial Accounting Standards ("SFAS") 109, which requires recognition of deferred income tax liabilities and assets for the expected future tax consequences of events that have been included in the financial statements or tax returns. Under this method, deferred income tax liabilities and assets are determined based on the difference between financial statement and tax bases of assets and liabilities using enacted tax rates in effect for the year in which the differences are expected to reverse. SFAS 109 also provides for the recognition of deferred tax assets if it is more likely than not that the assets will be realized in future years. -------------------------------------------------------------------------------- F-12 COMMODORE APPLIED TECHNOLOGIES, INC. AND SUBSIDIARIES Notes to Consolidated Financial Statements Continued -------------------------------------------------------------------------------- 1. Summary of Stock-Based Compensation Significant At December 31, 2005, Applied has one stock-based Accounting employee compensation plan, which is described more Policies fully in Note 11. Applied accounts for its plans under Continued the recognition and measurement principles of APB Opinion No. 25, Accounting for Stock Issued to Employees, and related interpretations. No stock-based employee compensation cost is reflected in net loss, as all options granted under those plans had an exercise price that equaled or exceeded the market value of the underlying common stock on the date of grant. Inasmuch as Applied cancelled certain options during 2002 and reissued new options to the option holders, the options are considered variable options and are revalued each quarter to determine the effect on operations, if any. The following table illustrates the effect on net loss per share if Applied had applied the fair value recognition provision of SFAS No. 123, Accounting for Stock-Based Compensation, to stock-based employee compensation. Years Ended December 31, ------------------------------- 2005 2004 2003 ------------------------------- Net loss, as reported $ (2,714) $ (2,404) $ (2,957) Addback: Stock-based employee compensation expense determined under instrinsic value based method for all awards, net of related tax effects - - - Deduct: Total stock- based employee compen-sation expense determined under fair value based method for all awards, net of related tax effects - - (1,544) ------------------------------- Pro forma net loss $ (2,714) $ (2,404) $ (4,501) ------------------------------- Loss per share: Basic and diluted - as reported $ (.93) $ (.43) $ (.72) ------------------------------- Basic and diluted - pro forma $ (.93) $ (.43) $ (.72) ------------------------------- The Black-Scholes model calculates the fair value of the grant based upon the following assumptions about the underlying stock: The expected dividend yield of the stock is zero, the assumed volatility is 237%, the expected risk-free rate of return is 3.7 percent, calculated as the rate offered on U.S. Government securities with the same term as the expected life of the options, and the expected term is the maximum possible term under the option. Stock options issued during the years ended December 31, 2003 had an average value of $.02, respectively. No stock options were granted in 2005 and 2004. -------------------------------------------------------------------------------- F-13 COMMODORE APPLIED TECHNOLOGIES, INC. AND SUBSIDIARIES Notes to Consolidated Financial Statements Continued -------------------------------------------------------------------------------- 1. Summary of Fair Value of Financial Instruments Significant The fair value of financial instruments is determined by Accounting reference to various market data and other valuation Policies techniques as appropriate. Accounts receivable, cash Continued equivalents, long term debt and the line of credit are financial instruments that are subject to possible material market variations from the recorded book value. Applied has reflected in the financial statements debt discounts which are being amortized over the estimated lives of the obligations. The debt discounts bring the obligations to a market rate of interest. The fair value of these financial instruments approximate the recorded book value as of December 31, 2005 and 2004. Use of Estimates The preparation of consolidated financial statements in conformity with U.S. generally accepted accounting principles requires management to make estimates and assumptions that affect the reported amounts of assets and liabilities and the disclosure of contingent assets and liabilities at the date of the financial statements and the reported amounts of revenues and expenses during the reporting period. Actual results could differ from those estimates. Reclassifications Certain amounts in prior years have been reclassified to conform with the current year presentation. 2. Going The accompanying consolidated financial statements have Concern been prepared under the assumption that Applied will continue as a going concern. Such assumption contemplates the realization of assets and the satisfaction of liabilities in the normal course of business. As shown in the consolidated financial statements, Applied incurred losses and negative cash flows from operating activities for the years ended December 31, 2005, 2004 and 2003. Applied also has a working capital deficit of $4,586 and an accumulated deficit of $79,290 at December 31, 2005. These factors raise substantial doubt about the Company's ability to continue as a going concern. The consolidated financial statements do not include any adjustments that might be necessary should Applied be unable to continue as a going concern. -------------------------------------------------------------------------------- F-14 COMMODORE APPLIED TECHNOLOGIES, INC. AND SUBSIDIARIES Notes to Consolidated Financial Statements Continued -------------------------------------------------------------------------------- 2. Going Applied's continuation as a going concern is dependent Concern upon its ability to generate sufficient cash flow to Continued meet its obligations on a timely basis, to obtain additional financing as may be required, and ultimately to attain profitability. Potential sources of cash include new contracts, external debt, the sale of new shares of Company stock or alternative methods such as mergers or sale transactions. No assurances can be given, however, that Applied will be able to obtain any of these potential sources of cash. Applied currently requires additional cash funding from outside sources to sustain existing operations and to meet current obligations and ongoing capital requirements. 3. Accounts The components of Applied's trade receivables are as Receivable follows as of December 31: 2005 2004 --------------------------------- Contract receivables $ 2,069 $ 268 Less: Allowance for doubtful accounts (4) (9) --------------------------------- Accounts receivable, net $ 2,065 $ 259 --------------------------------- Substantially all of CASI trade receivables are pledged to collateralize its line of credit (see Note 6). 4. Property Property and equipment consist of the following as of and December 31: Equipment Average Useful Life 2005 2004 -------------------------------------- Machinery and equipment 3 $ 716 $ 633 Furniture and fixtures 5 58 58 Computer equipment 4 246 222 ------------------------ 1,020 913 Less: accumulated depreciation and amortization (872) (818) ------------------------ Property and equipment, net $ 148 $ 95 ------------------------ -------------------------------------------------------------------------------- F-15 COMMODORE APPLIED TECHNOLOGIES, INC. AND SUBSIDIARIES Notes to Consolidated Financial Statements Continued -------------------------------------------------------------------------------- 5. Other Accrued Liabilities Other accrued liabilities consist of the following as of December 31: 2005 2004 ------------------------------- Compensation and employee benefits $ 1,987 1,876 Subcontractors 724 - Accrued interest 694 664 Loss reserve 376 376 Dividends payable 361 1,696 Related party advances 185 185 Other 123 91 Forbearance and exit fees - 219 ------------------------------- $ 4,450 $ 5,107 ------------------------------- 6. Line of Credit At December 31, 2005 and 2004, CASI had $141 and $0 outstanding, respectively, on a revolving line of credit. The line of credit is not to exceed 90% of eligible receivables or $2,000 and is due April 2006 with interest payable monthly at prime plus 2.0 percent (7% at December 31, 2005). The line of credit is collateralized by the assets of CASI and is guaranteed by Applied. 7. Notes Payable Notes payable and long-term debt consist of the and following at December 31: Long-Term Debt 2005 2004 ------------------------------ Convertible notes payable to individuals with interest at 10%, interest only due in aggregate monthly installments beginning in March 2006, maturing in March 2009, no prepayment option, secured by property and equipment and patents. The conversion price is the average closing price of the ten days preceding the conversion date, but shall not be more than $0.50 per share or less than $0.05 per share. See note 10. Also, these notes payable restrict the Company's ability to declare or pay dividends on and repurchase common stock, materially change the Company's business, enter a business combination, or transfer or sell assets. $ 5,426 $ 3,034 Notes payable to individuals with interest at 12%, in default as of January 15, 2005, secured by accounts receivable. 254 254 -------------------------------------------------------------------------------- F-16 COMMODORE APPLIED TECHNOLOGIES, INC. AND SUBSIDIARIES Notes to Consolidated Financial Statements Continued -------------------------------------------------------------------------------- 7. Notes Payable and Long-Term Debt Continued 2005 2004 ------------------------------ Note payable to a corporation with interest at 9%, unsecured and in default as of June 30, 2003. 254 254 Note payable to a corporation financing certain of the Company's insurance policies, with interest at 6%. 127 - Note payable to a bank with interest due at 17.5%, with monthly payments less than $1 secured by property and equipment. - 8 Unamortized discount for warrants - (4) ------------------------------ 6,061 3,546 Less current maturities (635) (512) ------------------------------ $ 5,426 $ 3,034 ------------------------------ Future maturities of notes payable and long-term debt are as follows: Year Ending December 31: Amount ------------------------ ------------------ 2006 $ 635 2007 - 2008 - 2009 5,426 Thereafter - ------------------ $ 6,061 ------------------ -------------------------------------------------------------------------------- F-17 COMMODORE APPLIED TECHNOLOGIES, INC. AND SUBSIDIARIES Notes to Consolidated Financial Statements Continued -------------------------------------------------------------------------------- 8. Income Applied provides for deferred income taxes on temporary Taxes differences which represent tax effects of transactions reported for tax purposes in periods different than for book purposes. The provision for income taxes for the years ended December 31 results in an effective tax rate which differs from federal income tax rates as follows: 2005 2004 2003 ----------------------------------------- Expected tax benefit at federal statutory rate $ (928) $ (777) $ (1,005) State income tax benefit, net of federal income tax benefit (90) (120) (177) Other 211 64 180 Change in valuation allowance 807 833 1,002 ----------------------------------------- Income tax benefit $ - $ - $ - ----------------------------------------- The components of the net deferred tax as of December 31, are as follows: 2005 2004 -------------------- Reserves and accruals $ 178 $ 168 Net operating loss carryforward 14,548 13,501 Depreciation, amortization, and impairment charges 1,444 1,694 --------------------- 16,170 15,363 Valuation allowance (16,170) (15,363) --------------------- Net deferred taxes $ - $ - --------------------- Applied conducts a periodic examination of its valuation allowance. Factors considered in the evaluation include recent and expected future earnings and Applied's liquidity and equity positions. As of December 31, 2005 and 2004, Applied has established a valuation allowance for the entire amount of net deferred tax assets. -------------------------------------------------------------------------------- F-18 COMMODORE APPLIED TECHNOLOGIES, INC. AND SUBSIDIARIES Notes to Consolidated Financial Statements Continued -------------------------------------------------------------------------------- 8. Income Applied has net operating loss ("NOL") carryforwards at Taxes December 31, 2005 of approximately $39,000 which expire Continued in years 2010 through 2025. The NOL carryforwards are limited to use against future taxable income due to changes in ownership and control. 9. Stockholders' Reverse Stock Split Equity On August 29, 2005, the Company effected the previously approved 1-for-20 reverse common stock split. As a result of the reverse stock split, the issued and outstanding shares of the Company's common stock were reduced from approximately 156 million shares to approximately 7.8 million shares. The reverse stock split, including the effect on loss per share, has been presented retroactively as if it had occurred on January 1, 2003. Series E Convertible Preferred Stock Effective November 4, 1999, Applied issued 335,000 shares of Series E Convertible Preferred Stock with a stated value of $10 per share. This stock had a dividend rate of 12% per annum through April 30, 2000 and thereafter 5% per annum paid quarterly. In addition the stock has a special dividend at the rate of 7.5% per annum which began to accrue on May 1, 2000 and continued to accrue until paid, payable on May 1, 2001. The Company accrued $28, $124 and $207 of dividends in 2005, 2004 and 2003, respectively, and issued 78,349 shares common stock to pay $142 of accrued dividends in 2003. The Series E Convertible Preferred Stock had a liquidation preference of $10 per share. In connection with the issuance of the Series E Convertible Preferred Stock, Applied issued warrants to purchase 28,625 shares of common stock at a purchase price equal to 110% of the market price on the date of closing ($24.00). These warrants were valued at $60 and expired on November 4, 2004. The Series E Convertible Preferred Stock was convertible into common stock at any time on or after April 30, 2000 at a conversion price equal to the arithmetic mean of the closing prices of common stock as reported in the respective stock exchange for the ten trading days immediately preceding the date of conversion. -------------------------------------------------------------------------------- F-19 COMMODORE APPLIED TECHNOLOGIES, INC. AND SUBSIDIARIES Notes to Consolidated Financial Statements Continued -------------------------------------------------------------------------------- 9. Stockholders' Series E Convertible Preferred Stock - Continued Equity During the years ended December 31, 2005, 2004 and 2003, Continued 5500, 32,500 and 162,500 shares of Series E Convertible Preferred Stock were converted into 291,629, 807,196 and 2,045,808 shares of common stock, respectively. As of December 31, 2005 there are no shares of Series E Convertible Preferred Stock outstanding. On April 12, 2005, the Company entered into the Shaar Exchange Agreement, in which the Company agreed that Shaar would exchange all of its right, title and interest in and to the remaining outstanding shares of the Series E Preferred and Series F Preferred (including all other accrued and unpaid dividends thereon) for 395,302 shares of the Company's Series I Preferred. Series F Convertible Preferred Stock In March 2000, Applied issued 266,700 shares of Series F Convertible Preferred Stock with a stated value of $10 per share. Transaction costs on the issuance totaled $230 resulting in net proceeds to Applied of $1,771. The stock had a dividend rate of 12% per annum through September 30, 2000 and thereafter 5% per annum paid quarterly. In addition the stock had a special dividend at the rate of 7.5% per annum which began to accrue October 1, 2000 and continued to accrue until paid, payable on October 1, 2001. The Company accrued $41, $148 and $148 of dividends in 2005, 2004 and 2003, respectively, and issued 27,579 shares of common stock to pay $40 of accrued dividends in 2003. The Series F Convertible Preferred Stock had a liquidation preference of $10 per share. In connection with the issuance of Series F Convertible Preferred Stock, Applied issued warrants to purchase 18,174 shares of common stock at $38.78 per share. These warrants expired on March 16, 2005. The Series F Convertible Preferred Stock was convertible into common stock at any time on or after September 30, 2000. On conversion, the investor was to receive for each converted preferred share the greater number of common stock as determined by (1) the face value per share ($10) plus accrued dividends divided by the average of the closing prices over a ten consecutive trading day period ending on the trading day immediately preceding the conversion date, or (2) $7.50 (the cash invested for each preferred share) divided by $1.93875. -------------------------------------------------------------------------------- F-20 COMMODORE APPLIED TECHNOLOGIES, INC. AND SUBSIDIARIES Notes to Consolidated Financial Statements Continued -------------------------------------------------------------------------------- 9. Stockholders' Series F Convertible Preferred Stock - Continued Equity During the year ended December 31, 2003, 17,500 shares Continued of Series F Convertible Preferred Stock were converted to 122,526 shares of common stock. Applied has no shares of Series F convertible stock outstanding at December 31, 2005. On April 12, 2005, the Company entered into the Shaar Exchange Agreement, in which the Company agreed that Shaar would exchange all of its right, title and interest in and to the remaining outstanding shares of the Series E Preferred and Series F Preferred (including all other accrued and unpaid dividends thereon) for 395,302 shares of the Company's Series I Preferred. Series H Convertible Preferred Stock Applied issued 800,000 shares of Series H Preferred stock (the "Series H Preferred"), par value $0.001 per share, each such share of Series H Preferred having a stated value of $1 per share. The Series H Preferred shall have the following rights, privileges, and limitations: a) The conversion feature shall be exercisable on or after June 30, 2003. b) No Series H Preferred may be converted prior to June 30, 2003. Until July 31, 2005, only 80,000 shares of the Series H Preferred shall be convertible in any calendar quarter. The balance of any unconverted Series H Preferred Stock may be converted at any time on or after August 1, 2005. c) The conversion price of the Series H Preferred shall be determined by the average closing price of Company's common stock in the previous 30 trading days, but in no event shall the conversion price be less than $4.00 per share. d) The conversion price of the Series H Preferred shall be determined by the average closing price of Company's common stock in the previous 30 trading days, but in no event shall the conversion price be less than $4.00 per share. -------------------------------------------------------------------------------- F-21 COMMODORE APPLIED TECHNOLOGIES, INC. AND SUBSIDIARIES Notes to Consolidated Financial Statements Continued -------------------------------------------------------------------------------- 9. Stockholders' Series H Convertible Preferred Stock - Continued Equity Continued e) The Series H Preferred shall have a non-cumulative annual dividend of 3%, payable in cash or Series H Preferred within 30 days of the end of Applied's fiscal year, at Applied's election. Dividends of $24, $24 and $24 were accrued during 2005, 2004, and 2003 respectively. f) The Series H Preferred shall not be transferable. As of December 31, 2005, there are 800,000 shares of Series H Preferred outstanding. Series I Convertible Preferred Stock Effective as of April 12, 2005, the Company authorized the issuance of 550,000 shares of Series I Convertible Preferred Stock ("Series I Preferred"), par value $0.001 per share, each such share of Series I Preferred having a stated value of $10.00 per share. On April 12, 2005, the Company entered into the Shaar Exchange Agreement, in which the Company agreed that Shaar would exchange all of its right, title and interest in and to the remaining outstanding shares of the Series E Preferred and Series F Preferred (including all other accrued and unpaid dividends thereon) for 395,302 shares of the Company's Series I Preferred. The Series I Preferred shall have the following rights, privileges, and limitations: a) The conversion feature shall be exercisable immediately. b) The conversion price of the Series I Preferred shall be determined by the average closing price of Company's common stock in the previous 10 trading days, but in no event shall the conversion price be more than $0.57 per share. c) If the Company's common stock is not listed on an exchange at the time of the conversion, then the conversion price will be 50% of the market price at that time. -------------------------------------------------------------------------------- F-22 COMMODORE APPLIED TECHNOLOGIES, INC. AND SUBSIDIARIES Notes to Consolidated Financial Statements Continued -------------------------------------------------------------------------------- 9. Stockholders' Series I Convertible Preferred Stock - Continued Equity Continued d) The Series I Preferred shall have a non-cumulative annual dividend of 10%, payable in cash or shares of the Company's common stock at the Company's election. e) Dividend will be paid quarterly commencing May 15, 2005, to the Holders of record of shares of the Series I Preferred Stock. Dividends until February 14, 2006 shall accrue but shall not be payable until February 15, 2006. f) The Company has reserved 3,750,000 shares of its common stock for the conversion of the Series I Preferred. g) The Company accrued $184 of dividends in 2005 on the Series I Preferred. During the year ended December 31, 2005, 7000 shares of Series I Convertible Preferred Stock were converted to 439,206 shares of common stock. Applied has no shares of Series I convertible stock outstanding at December 31, 2005. Series J Convertible Preferred Stock Effective as of October 1, 2005, the Company authorized the issuance of 550,000 shares of Series J Convertible Preferred Stock ("Series J Preferred"), par value $0.001 per share, each such share of Series I Preferred having a stated value of $10.00 per share. The Series J Preferred shall have the following rights, privileges, and limitations: a) The conversion feature shall be exercisable immediately. b) The conversion price of the Series J Preferred shall be determined by the average closing price of Company's common stock in the previous 10 trading days, but in no event shall the conversion price be more than $0.50 per share or less than $0.05 per share. c) If the Company's common stock is not listed on an exchange at the time of the conversion, then the conversion price will be 50% of the market price at that time. -------------------------------------------------------------------------------- F-23 COMMODORE APPLIED TECHNOLOGIES, INC. AND SUBSIDIARIES Notes to Consolidated Financial Statements Continued -------------------------------------------------------------------------------- 9. Stockholders' Series J Convertible Preferred Stock - Continued Equity Continued d) The Series J Preferred shall have a non-cumulative annual dividend of 10%, payable in cash or shares of the Company's common stock at the Company's election. e) Dividend will be paid quarterly commencing March 31, 2006, to the Holders of record of shares of the Series J Preferred Stock. f) The Company has reserved 40,000,000 shares of its common stock for the conversion of the Series J Preferred and the Amended New Shaar Convertible Note. g) The Company accrued $97 of dividends in 2005 on the Series J Preferred. Effective October 1, 2005, the Company entered into the New Shaar Exchange Agreement, in which the Company agreed that Shaar will exchange all of its right, title and interest in and to the remaining outstanding shares of the Series I Preferred (excluding all other accrued and unpaid dividends thereon) for 388,302 shares of the Company's Series J Preferred. During the year ended December 31, 2005, no shares of Series J Convertible Preferred Stock were converted to shares of common stock. Applied has 388,302 shares of Series J convertible stock outstanding at December 31, 2005. Cumulative unpaid dividends on Preferred Stock are $361 and $1,696 at December 31, 2005 and 2004, respectively. The holders of all series of convertible preferred stock have the right, voting as a class, to approve or disapprove of the issuance of any class or series of stock ranking senior to or on a parity with the convertible preferred stock with respect to declaration and payment of dividends or the distribution of assets on liquidation, dissolution or winding-up. Upon liquidation, dissolution or winding up of Applied, holders of Series E and Series F Convertible Preferred Stock are entitled to receive liquidation distributions equivalent to $10.00 per share before any distribution to holders of the Common Stock or any capital stock ranking junior to the Series E Convertible Preferred Stock. There have been no shares of Series H Preferred stock converted into common shares as of December 31, 2005. -------------------------------------------------------------------------------- F-24 COMMODORE APPLIED TECHNOLOGIES, INC. AND SUBSIDIARIES Notes to Consolidated Financial Statements Continued -------------------------------------------------------------------------------- 10. Embedded On April 12, 2005, Applied, through the issuance of the Derivative Series I Preferred and the Amended and Restated Shaar Liability Note, recorded an embedded derivative liability due to the conversion feature of these financial instruments pursuant to SFAS No. 133 and EITF 00-19. The Company recorded an embedded derivative liability of $8,063 at its inception on April 12, 2005, $3,702 of which was recorded as a deemed dividend to preferred stockholders, and $4,361 was recorded as a debt discount. Effective October 1, 2005, the Company issued Series J Preferred in exchange for the Series I Preferred as well as further amending the Amended and Restated Shaar Note. These changes amended the terms of the conversion features and removed the provisions requiring embedded derivative accounting, and the Company reclassified the embedded derivative liability to equity on October 1, 2005. Prior to the reclassification, the Company revalued the embedded derivative which resulted in an increase to the derivative liability and corresponding derivative loss of $543. After the revaluation, the embedded derivative liability was $8,606 and the remaining debt discount was $3,861 at time of reclassification, which resulted in an increase to equity of $4,745. 11. Stock Options Stock Options and Stock In December 1998, Applied adopted its 1998 Stock Option Warrants Plan pursuant to which officers, directors, key employees and/or consultants of Applied can receive non-qualified stock options to purchase up to an aggregate 250,000 shares of Applied's Common Stock. During 1999 and 2000 Applied increased the number of shares authorized by 250,000 shares each year resulting in 750,000 shares currently available under the 1998 stock option plan. Exercise prices applicable to stock options issued under this Plan represent no less than 100% of the fair value of the underlying common stock as of the date of grant. Stock options granted under the plan may vest immediately or for any period up to five years. In as much as Applied rescinded certain options during 2002 and reissued new options to the option holders, the options are considered variable options and are revalued each quarter to determine the effect on operations, if any. There is no variable option expense recognized during 2005 and 2004 as the variable options' exercise price exceeded the fair market value of the Company's stock. -------------------------------------------------------------------------------- F-25 COMMODORE APPLIED TECHNOLOGIES, INC. AND SUBSIDIARIES Notes to Consolidated Financial Statements Continued -------------------------------------------------------------------------------- 11. Stock Options A summary of the status of options granted under and and Stock outside of the Plan as of December 31, 2005, 2004 and Warrants 2003, and changes during the years then ended is Continued presented below: 2005 2004 2003 --------------------------------------------------------------------- Shares Weighted Weighted Weighted Average Average Average Exercise Exercise Exercise Price Shares Price Shares Price --------------------------------------------------------------------- Options outstanding, beginning of year 4,325,841 $ 1.06 4,364,298 $ 1.08 510,230 $ 4.80 Granted - - - - 3,854,068 0.57 Exercised - - - - - - Rescinded - - - - - - Forfeited - - 38,457 1.40 - - --------------------------------------------------------------------- Options outstanding, end of year 4,325,841 $ 1.06 4,325,841 $ 1.06 4,364,298 $ 1.06 --------------------------------------------------------------------- Options Outstanding Options Exercisable ------------------------------------------------------------------- Weighted Average Weighted Weighted Range of Remaining Average Average Exercise Number Contractual Exercise Number Exercise Prices Outstanding Life Price Exercisable Price ---------------------------------------------------------------------------------- $ 0.57 - 0.57 3,854,068 2.96 years $ 0.57 3,854,068 $ 0.57 1.40 - 1.40 453,904 2.96 years 1.40 453,904 1.40 40 - 120 17,869 0.98 years 97.17 17,869 97.17 ---------------------------------------------------------------------------------- 4,325,841 2.95 years $ 1.06 4,325,841 $ 1.06 ---------------------------------------------------------------------------------- Stock Warrants A summary of the warrants granted as of December 31, 2005, 2004 and 2003 and changes during the periods then ended is presented below: 2005 2004 2003 --------------------------------------------------------------------- Shares Weighted Weighted Weighted Average Average Average Exercise Exercise Exercise Price Shares Price Shares Price --------------------------------------------------------------------- Warrants outstanding, beginning of 1,593,880 $ 3.60 1,789,718 $ 3.60 1,203,516 $ 70.00 year Granted 200,000 .20 - - 1,532,790 0.57 Exercised - - (25,000) .57 - - Repriced - - - - (75,000) 1.00 Rescinded - - - - (5,651) 38.80 Expired (90,257) 1.49 (170,838) 1.00 (865,937) 70.00 --------------------------------------------------------------------- Warrants outstanding, end of year 1,703,623 $ 0.55 1,593,880 $ 3.60 1,789,718 $ 3.60 --------------------------------------------------------------------- -------------------------------------------------------------------------------- F-26 COMMODORE APPLIED TECHNOLOGIES, INC. AND SUBSIDIARIES Notes to Consolidated Financial Statements Continued -------------------------------------------------------------------------------- 11. Stock Options Outstanding warrants at December 31, 2005 are as and Stock follows: Warrants Continued Number of Current Granted Granted Granted Granted Granted Warrants Exercise 2001 2002 2003 2004 2005 Outstanding Price Expiration Date ----------------------------------------------------------------------------------------------------------- 8,333 - - - - 8,333 4.40 June 2006 - - 25,000 - - 25,000 0.57 October 2006 - - 50,000 - - 50,000 0.57 February 2007 - - 50,000 - - 50,000 0.57 April 2006 - - 1,367,790 - - 1,367,790 0.57 November 2008 - - 2,500 - - 2,500 0.57 November 2008 - - - - 200,000 200,000 0.20 April 2008 ----------------------------------------------------------------------------- 8,333 - 1,495,290 - 200,000 1,703,623 ----------------------------------------------------------------------------- In 2003, 75,000 warrants originally issued with debt were repriced and extended, and 50,000 warrants were newly issued, both to extend the related debt. The Company recorded a debt discount of $30 at December 31, 2003. Also in 2003, 12,500 warrants were issued to extend the related debt. A debt discount of $5 was recorded, with $3 of the debt discount amortized during 2004. As of December 31, 2005 all warrants are exercisable. 12. Loss Basic loss per share is computed by dividing net loss Per Share available to common shareholders by the weighted average number of shares outstanding during the period. Diluted loss per share is computed using the weighted average number of shares determined for the basic computations plus the number of shares that would be issued assuming all contingently issuable shares having a dilutive effect on earnings per share were outstanding for the period. Options and warrants to purchase 6,029,463, 5,919,721 and 6,154,016 shares of common stock as of December 31, 2005, 2004 and 2003, respectively, were excluded from the calculation of diluted loss per share as the effect would have been anti-dilutive as the Company experienced net losses. -------------------------------------------------------------------------------- F-27 COMMODORE APPLIED TECHNOLOGIES, INC. AND SUBSIDIARIES Notes to Consolidated Financial Statements Continued -------------------------------------------------------------------------------- 13. Related Party Applied had the following related party transactions not Transactions fully disclosed elsewhere: Applied has non-interest bearing payables to related parties of $185 and $185 at December 31, 2005 and 2004, recorded in other accrued liabilities. During 2003, 1,367,790 warrants valued at $470 were issued to a member of the board of directors for services, and rent of facilities, and forbearance on payment of a note that is due on demand. Applied has a note payable to a member of the board of directors that is due on demand and carries interest at 9%. The balance due at December 31, 2005 and 2004 is $312 and $312, respectively, and is included in the related party payable. Related party receivables are offset against these related party notes payable. Applied has long-term debt to shareholders of Applied. See Note 7. 14. Commitments Operating Leases and Applied and its subsidiaries are committed under Contingencies non-cancelable operating leases for office space and other equipment. Future obligations under the leases are as follows: 2006 $ 93 2007 42 2008 42 2009 14 -------- $ 191 -------- Rent expense approximated $156, $126, and $325 in 2005, 2004 and 2003, respectively. Rent expense in 2003 includes $198 from the issuance of warrants to a member of the board of directors for office rent expense. Executive Bonus Plan Applied has a five-year Executive Bonus Plan (the "Bonus Plan") under which a number of executives and employees of Applied are entitled to formula bonuses. No bonuses are accrued at December 31, 2005 and 2004. -------------------------------------------------------------------------------- F-28 COMMODORE APPLIED TECHNOLOGIES, INC. AND SUBSIDIARIES Notes to Consolidated Financial Statements Continued -------------------------------------------------------------------------------- 14. Commitments Litigation and Applied has matters of litigation arising in the Contingencies ordinary course of business which in the opinion of Continued management will not have a material adverse effect on its financial condition or results of operations. Guarantee Applied, along with several other entities, in a prior year, guaranteed a performance bond of Commodore Separation Technologies, Inc. relating to a contract with the Port of Baltimore. Applied was notified on June 28, 2000 that the performance bond is being called. It is not known at this time the amount, if any, Applied's share will be. No amount has been reflected in these consolidated financial statements as the amount is not determinable. 15. 401(K) Applied has adopted a 401(K) savings plan for all Savings Plan employees who qualify as to age and service. Contributions by Applied are discretionary. Applied made no annual contributions to the plan during the years ended December 31, 2005, 2004 and 2003. 16. Segment Using the guidelines set forth in SFAS No. 131, Information "Disclosures About Segments of an Enterprise and Related Information," Applied has identified two reportable segments as follows: 1. CASI, which primarily provides various engineering, legal, sampling and public relations services to government agencies on a cost plus basis. 2. Solution, which, through CASI, has equipment to treat mixed and hazardous waste through a patented process using sodium and anhydrous ammonia. Common overhead costs are allocated between segments based on a record of time spent by executives. -------------------------------------------------------------------------------- F-29 COMMODORE APPLIED TECHNOLOGIES, INC. AND SUBSIDIARIES Notes to Consolidated Financial Statements Continued -------------------------------------------------------------------------------- 16. Segment Applied evaluates segment performance based on the Information segment's net income (loss). The accounting policies of Continued the segments are the same as those described in the summary of significant accounting policies. Applied's foreign and export sales and assets located outside of the United States are not significant. Summarized financial information concerning Applied's reportable segments is shown in the following tables. Corporate Overhead 2005 Total CASI Solution & Other ---- ---------------------------------------------------- Revenues $ 10,275 $ 10,189 $ 86 $ - Costs and expenses: Cost of revenues 9,132 9,078 54 - Research and development 5 5 - - General and administrative 2,072 618 16 1,438 Depreciation and amortization 54 54 - - ---------------------------------------------------- Total costs and expenses 11,263 9,755 70 1,438 ---------------------------------------------------- Income (loss) from operations (988) 434 16 (1,438) Derivative loss (543) - - (543) Interest expense (1,183) (32) - (1,151) ---------------------------------------------------- Loss from operations before income taxes (2,714) 402 16 (3,132) Income taxes - - - - ---------------------------------------------------- Net income (loss) $ (2,714) $ 402 $ 16 $ (3,132) ---------------------------------------------------- Total assets $ 2,417 $ 2,402 $ - $ 15 ---------------------------------------------------- Expenditures for long-lived assets $ 107 $ 87 $ - $ 20 ---------------------------------------------------- -------------------------------------------------------------------------------- F-30 COMMODORE APPLIED TECHNOLOGIES, INC. AND SUBSIDIARIES Notes to Consolidated Financial Statements Continued -------------------------------------------------------------------------------- 16. Segment Information Continued Corporate Overhead 2004 Total CASI Solution & Other ---- ----------------------------------------------------- Revenues $ 738 $ 698 $ 40 $ - Costs and expenses: Cost of revenues 919 548 371 - Research and development 9 - 9 - General and administrative 1,674 308 120 1,246 Depreciation and amortization 136 - - 136 ----------------------------------------------------- Total costs and expenses 2,738 856 500 1,382 ----------------------------------------------------- Income (loss) from operations (2,000) (158) (460) (1,382) Interest expense (404) (1) - (403) ----------------------------------------------------- Loss from operations before income taxes (2,404) (159) (460) (1,785) Income taxes - - - - ----------------------------------------------------- Net income (loss) $ (2,404) $ (159) $ (460) $ (1,785) ----------------------------------------------------- Total assets $ 369 $ 354 $ - $ 15 ----------------------------------------------------- Expenditures for long-lived assets $ 61 $ 61 $ - $ - ----------------------------------------------------- -------------------------------------------------------------------------------- F-31 COMMODORE APPLIED TECHNOLOGIES, INC. AND SUBSIDIARIES Notes to Consolidated Financial Statements Continued -------------------------------------------------------------------------------- 16. Segment Information Continued Corporate Overhead 2003 Total CASI Solution & Other ---- ----------------------------------------------------- Revenues $ 660 $ 568 $ 92 $ - Costs and expenses: Cost of revenues 811 721 90 - Research and development 70 - 70 - General and administrative 1,700 570 73 1,057 Depreciation and amortization 267 - - 267 ----------------------------------------------------- Total costs and expenses 2,848 1,291 233 1,324 ----------------------------------------------------- Income (loss) from operations (2,188) (723) (141) (1,324) Interest expense (769) (1) - (768) ----------------------------------------------------- Loss from operations before income taxes (2,957) (724) (141) (2,092) Income taxes - - - - ----------------------------------------------------- Net (loss) income $ (2,957) $ (724) $ (141) (2,092) ----------------------------------------------------- Total assets $ 246 $ 84 $ - $ 162 ----------------------------------------------------- Expenditures for long-lived assets $ 11 $ - $ - $ 11 ----------------------------------------------------- -------------------------------------------------------------------------------- F-32 COMMODORE APPLIED TECHNOLOGIES, INC. AND SUBSIDIARIES Notes to Consolidated Financial Statements Continued -------------------------------------------------------------------------------- 17. Recent In February 2006, the Financial Accounting Standards Accounting Board ("FASB") issued SFAS No. 155, Accounting for Pronounce- Certain Hybrid Instruments ("SFAS 155"). SFAS 155 amends ments SFAS 133 and SFAS No. 140, Accounting for Transfers and Servicing of Financial Assets and Extinguishments of Liabilities ("SFAS 140"). SFAS 155 allows financial instruments that have embedded derivatives to be accounted for as a whole, eliminating the need to bifurcate the derivative from its host, if the holder elects to account for the whole instrument on a fair value basis. In addition, among other changes, SFAS 155 (i) clarifies which interest-only strips and principal-only strips are not subject to the requirements of SFAS 133; (ii) establishes a requirement to evaluate interests in securitized financial assets to identify interests that are freestanding derivatives or that are hybrid financial instruments that contain an embedded derivative requiring bifurcation; (iii) clarifies that concentrations of credit risk in the form of subordination are not embedded derivatives; and (iv) eliminates the prohibition on a qualifying special-purpose entity ("QSPE") from holding a derivative financial instrument that pertains to a beneficial interest other than another derivative financial interest. SFAS 155 will be applied prospectively and is effective for all financial instruments acquired or issued for fiscal years beginning after September 15, 2006. SFAS 155 is not expected to have a material impact on the Company's consolidated financial statements. The FASB has issued additional guidance relating to derivative financial instruments as follows: In June 2005, the FASB cleared SFAS 133 Implementation Issue No. B38, Embedded Derivatives: Evaluation of Net Settlement with Respect to the Settlement of a Debt Instrument through Exercise of an Embedded Put Option or Call Option ("Issue B38") and SFAS 133 Implementation Issue No. B39, Embedded Derivatives: Application of Paragraph 13(b) to Call Options That Are Exercisable Only by the Debtor ("Issue B39"). Issue B38 clarified that the potential settlement of a debtor's obligation to a creditor occurring upon exercise of a put or call option meets the net settlement criteria of SFAS No. 133. -------------------------------------------------------------------------------- F-33 COMMODORE APPLIED TECHNOLOGIES, INC. AND SUBSIDIARIES Notes to Consolidated Financial Statements Continued -------------------------------------------------------------------------------- 17. Recent Issue B39 clarified that an embedded call option, in Accounting which the underlying is an interest rate or interest Pronounce- rate index, that can accelerate the settlement of a debt ments host financial instrument should not be bifurcated and Continued fair valued if the right to accelerate the settlement can be exercised only by the debtor (issuer/borrower) and the investor will recover substantially all of its initial net investment. Issues B38 and B39, which must be adopted as of the first day of the first fiscal quarter beginning after December 15, 2005, are not anticipate to have a material impact on the Company's consolidated financial statements. In March 2005, the FASB issued Interpretation No. 47, Accounting for Conditional Asset Retirement Obligations, or "FIN 47," which clarifies that the term "conditional asset retirement obligation" as used in FASB statement No. 143, "Accounting for Asset Retirement Obligations". Conditional asset retirement obligation refers to a legal obligation to perform an asset retirement activity in which the timing and/or method of settlement are conditional on a future event that may or may not be within the control of the entity. An entity is required to recognize a liability for the fair value of a conditional asset retirement obligation if the fair value of the liability can be reasonably estimated. FIN 47 is effective for fiscal years ending after December 15, 2005. The Company does not expect the adoption of FIN 47 to have a material impact on its consolidated balance sheet or consolidated statement of cash flows. In May 2005, the Financial Accounting Standards Board, or "FASB," issued SFAS No. 154, Accounting Changes and Error Corrections. This statement replaces APB No. 20 and SFAS No. 3, and changes the requirements for the accounting for and reporting of a change in accounting principle. SFAS No. 154 requires retrospective application to prior periods' financial statements of changes in accounting principle. The statement defines retrospective application as the application of a different accounting principle to prior accounting periods as if that principle had always been used or as the adjustment of previously issued financial statements to reflect a change in the reporting entity. This statement shall be effective for accounting changes and correction of errors made in years beginning after December 15, 2005. Accordingly, we will adopt the provisions of SFAS No. 154 at the beginning of our 2006 fiscal year. -------------------------------------------------------------------------------- F-34 COMMODORE APPLIED TECHNOLOGIES, INC. AND SUBSIDIARIES Notes to Consolidated Financial Statements Continued -------------------------------------------------------------------------------- 17. Recent In December 2004, the FASB issued SFAS No. 123R, Accounting Share-Based Payment, which requires companies to measure Pronounce- and recognize compensation expense for all stock-based ments payments at fair value. SFAS 123R is effective for Continued fiscal years beginning after June 15, 2005 and, thus, will be effective for the Company beginning with the fiscal year of 2006, as deferred. Early adoption is encouraged and retroactive application of the provisions of SFAS 123R to the beginning of the fiscal year that includes the effective date is permitted, but not required. The Company is currently evaluating the impact of SFAS 123R, and the adoption may have a material impact on the Company's financial position and results of operations. See Stock Compensation in Note 1 for more information related to the pro forma effects on reported net loss and net loss per share of applying the fair value recognition provisions of the previous SFAS 123, Accounting for Stock-Based Compensation, to stock-based employee compensation. -------------------------------------------------------------------------------- F-34